Pairwise Alignments

Query, 709 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 861 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  124 bits (312), Expect = 1e-32
 Identities = 92/256 (35%), Positives = 139/256 (54%), Gaps = 18/256 (7%)

Query: 458 QLVTNEKLTALGELTAGIAHEINNP-TAVILGNMELLRYELGDKAEVVKEEIDLVIQQVG 516
           Q+   +K+ A+G L  GIAH+ NN  TA++L +  LL       A+    ++  + +   
Sbjct: 464 QMAQTQKMNAVGTLAGGIAHDFNNVLTAILLSSDHLLLQ--ARPADPSFADLMEIKRNAN 521

Query: 517 RISTIIRSLLQYSRPGEFNAPLEMHPITPIIEEMLVLVRHSIQKQEVVLITELNASC-PV 575
           R + ++R LL +SR      P  ++ +T +I ++ +LV   I    V L  +      PV
Sbjct: 522 RAAVLVRQLLAFSRKQTMR-PAVLN-LTDVIGDLRMLVDRLISGTNVKLEVDYGRDLWPV 579

Query: 576 QVNRPQLLQVLINLVVNAAHAMDGKGRIWVRTYDWVQQDIA-IG---------VKIEVED 625
           + +  Q  QVLINL VNA  AM   G+I +RT +  +++IA +G         V +EV D
Sbjct: 580 KTDLSQFEQVLINLCVNARDAMPDGGKITIRTRNVDEKEIAALGRPEFPAEDMVMVEVAD 639

Query: 626 EGSGIEPEQLGRIFDPFYTTRK--DGTGLGLSLSYGIIKRIGGTIEVSSVLGKGSIFTIG 683
            G+GI PE + +IF+PF+TT++   GTGLGLS+ YGI+K+ GG I   S +GKG+ F I 
Sbjct: 640 NGTGIPPEIMDKIFEPFFTTKEVGKGTGLGLSMVYGIVKQSGGYIYPESEVGKGTAFRIY 699

Query: 684 LYHEAKEDHQNNPYDG 699
           L     E  Q    DG
Sbjct: 700 LPRHVVEVVQVMGQDG 715