Pairwise Alignments

Query, 464 a.a., ABC transporter, ATP-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 519 a.a., dipeptide ABC transporter ATP-binding protein from Paraburkholderia sabiae LMG 24235

 Score =  100 bits (248), Expect = 1e-25
 Identities = 117/452 (25%), Positives = 195/452 (43%), Gaps = 65/452 (14%)

Query: 23  EITLTIGRGQCHCVSGPTGSGKS----SLINLL-----AGAQNRPHEGDIWRHPQLVTGL 73
           +++L IGRG+   + G +GSGKS    S++ LL     +GA     E  + +  + + GL
Sbjct: 10  DVSLAIGRGERVALVGESGSGKSVTALSILRLLNDAQTSGAVRFDGEDLLMKSEREMRGL 69

Query: 74  -------VMQDPQTQLHR-QTVGAEVVFSLE-NLGIPAESMLPKVQHALRRVGLF---LR 121
                  + Q+P T L+   T+G ++  ++  + G+ A     +    L R G+     R
Sbjct: 70  RGSDIAMIFQEPMTALNPLYTIGEQIAETIVMHDGVSAGEARKRAVALLERTGITEPGKR 129

Query: 122 LDTPVSTLSLGQKYRLMIAAQLVCEPDLLLLDEPWAQLDDHGVSELLVVLRNLINE---- 177
           +++    LS GQ+ R MIA  L C P LLL DEP   LD    ++++ +L  L  E    
Sbjct: 130 VNSYPHQLSGGQRQRAMIAMALACRPRLLLADEPTTALDVTIRAQIVELLLELQREEAEK 189

Query: 178 -GMALVLVEHNATAFAEIIQYYWQLEDGHL----------SAGLHQTPEILPVIAPAWRT 226
            GMA++L+ H+        Q    +E G L           +  H   + L    P  R 
Sbjct: 190 RGMAVLLITHDLNLVRHFAQRVAVMEKGVLVESGPVETLFESPQHPYTQRLLQSRPE-RA 248

Query: 227 ASKCEPFGKVLVQAEP-----------FEFSFDSGHLLFTCPNGFKLYAGEIVTLIGDNG 275
                P   VL+ A             F   F SGH          +  GE + ++G++G
Sbjct: 249 VVPVLPIAPVLLDARDVSVDFRTKLPGFSGWFRSGHFRAVADATVSVRQGETLGIVGESG 308

Query: 276 SGKTSLL-------KTLAGALSLKQRLPLKVLGRRPKLGVYGAELGLLMQRPSRQLFETT 328
           SGK++L        KT  GA+  + R      GR        + + ++ Q P   L    
Sbjct: 309 SGKSTLAMALLGLQKTSHGAIEFQGRALGSYRGREQT--ALRSNMQVVFQDPFSSLSPRQ 366

Query: 329 VLAEMQ---FSLKRFELPCE----RAAQLLEELDLNHLA-ELPPHQLSYGQQHLIALASL 380
            +  +     +L + EL  +    +   +L E+ ++  A +  PH+ S GQ+  IA+A  
Sbjct: 367 TIERIVGEGLALHKPELAPDARRDKVISVLREVGIDRTALQRYPHEFSGGQRQRIAIARA 426

Query: 381 ACMRPKVLLLDDPLAGMDKHYSSKVWYLLQKL 412
             + P++L+LD+P + +D     +V  LL  L
Sbjct: 427 LVLEPRILILDEPTSALDVSIQQQVLKLLAGL 458