Pairwise Alignments

Query, 464 a.a., ABC transporter, ATP-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 550 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score = 96.3 bits (238), Expect = 2e-24
 Identities = 138/535 (25%), Positives = 224/535 (41%), Gaps = 77/535 (14%)

Query: 3   LLELEGVSFNYGSQ--LPLVFQEITLTIGRGQCHCVSGPTGSGKSSLINLLAG--AQN-- 56
           +LELE V+  Y        V + ++  I  G+   + G +GSGK++    + G  A N  
Sbjct: 15  VLELEDVAIAYRDDDGERTVVEGVSFAIQPGEVVALVGESGSGKTTTAQAVIGLLADNGR 74

Query: 57  ------RPHEGDI--WRHPQL------VTGLVMQDPQTQLHR-QTVGAEVVFSLENLGIP 101
                 R +  DI  W  P+L      V  LV QDP + L+  +T+G +V    E L + 
Sbjct: 75  LTRGAIRLNGADISRWSQPRLDSIRGRVVSLVPQDPGSSLNPVKTIGEQVD---EILRLH 131

Query: 102 AESMLPKVQHA----LRRVGLF---LRLDTPVSTLSLGQKYRLMIAAQLVCEPDLLLLDE 154
            +S   +++      L RVGL    LR       LS G K R++IA  +  +P L++ DE
Sbjct: 132 QKSDRRRLRRQTLALLTRVGLTEPELRAGQYPHELSGGMKQRVLIAIAIALKPALIIADE 191

Query: 155 PWAQLDDHGVSELLVVLRNLINE-GMALVLVEHNATAFAEIIQYYWQLEDGHLSAG---- 209
           P + LD      +L +L  L  E G A++ V H+    AE        + G++       
Sbjct: 192 PTSALDVTVQKRILDLLDELRRENGTAILFVTHDLAVAAERADRLLVFQKGYIQEQGPTR 251

Query: 210 --------------LHQTPEILPVIAPAWRTASKCEPFGKVLVQAEPFEFSFD---SGHL 252
                         L   P + P   P+   AS    F + +VQ E     F    S   
Sbjct: 252 QVLSAPQSQYARTLLANIPSLAPARRPSRADASDQPIFSQPIVQVEQLVQEFPLTGSRKQ 311

Query: 253 LFTCPNG--FKLYAGEIVTLIGDNGSGKTSLLKTLAG------ALSLKQRLPLKVLGRRP 304
            F   +   F +  G    ++G++GSGKT+  + + G         L     +  L R  
Sbjct: 312 PFRAVDAVSFSVAPGTTHAIVGESGSGKTTTARMILGFQRPTAGRILIDGTDITQL-RGE 370

Query: 305 KLGVYGAELGLLMQRP------SRQLFETTVLAEMQFSLKRFELPCERAAQLLEELDLN- 357
            L  +   + L+ Q P      S++LF+        F+         R  ++ E + L  
Sbjct: 371 ALRQFRQTIQLVYQNPFSSLDPSQRLFDIVEEPLRNFNRYTRTERANRVHEIFERVALPA 430

Query: 358 HLAELPPHQLSYGQQHLIALASLACMRPKVLLLDDPLAGMDKHYSSKVWYLLQKLTAQ-G 416
            L +  P +LS GQ+  +A+A    + PKVL+LD+ ++ +D    +++  LL++L A  G
Sbjct: 431 SLLQRRPAELSGGQRQRVAIARALVLEPKVLVLDEAVSALDVTVQAQILRLLEELQASLG 490

Query: 417 CAILLTSHRKIPRDQISRQLH-LHHGQLFEDVPEMQL------RYVDQMSSTLVG 464
              L  SH      QI+  +  L+HG+  E  P  Q+      RY  ++   + G
Sbjct: 491 LTYLFISHDLAVVRQIADTVSVLYHGKQVESGPVEQIFARPAERYTRELIDAIPG 545