Pairwise Alignments

Query, 464 a.a., ABC transporter, ATP-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 558 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola 67-19

 Score =  108 bits (271), Expect = 3e-28
 Identities = 128/510 (25%), Positives = 217/510 (42%), Gaps = 65/510 (12%)

Query: 3   LLELEGVSFNY----GSQLPLVFQEITLTIGRGQCHCVSGPTGSGKSSL---INLLAGAQ 55
           +L ++  S +Y    GS LP V ++ITL + RG    + G +GSGK++L   I     + 
Sbjct: 15  VLAVKDYSLDYTLPDGSHLP-VLRDITLHVNRGDVVGLVGESGSGKTTLGWAIMRWLASN 73

Query: 56  NRPHEGDIW----RHPQLVT-----------GLVMQDPQTQLHRQ-TVGAEVVFSLE-NL 98
            R   G+I         L T           G++ QDP   L+   T+G +V   L  + 
Sbjct: 74  ARERAGEIHLGGLNLRTLATDKLHALRGGKLGMIFQDPSASLNPTLTLGEQVTEVLRRHR 133

Query: 99  GIPAESMLPKVQHALRRVGL---FLRLDTPVSTLSLGQKYRLMIAAQLVCEPDLLLLDEP 155
            + A       +  LR V L    L +      +S G+K R++IA    C+PD L+ DEP
Sbjct: 134 RLNAREAQQYAETLLRDVDLKNPALMMQRYPHQVSGGEKQRILIATAFACQPDCLIFDEP 193

Query: 156 WAQLDDHGVSELLVVLRNLINE-GMALVLVEHNATAFAEIIQYYWQLEDGHL-----SAG 209
              LD    +++L +   L  E G+A + + H+    + +      LE G +     +  
Sbjct: 194 TTALDVISSAQILALFERLREETGVAALYISHDLALVSRVTDSVCVLEKGRIVEQADARA 253

Query: 210 LHQTPE-------ILPVIAPAWRTASKCEPFGKVLVQAEPFEFSFDSGHLL--------- 253
           L   P+       I  V  PA R   +  P    L+        +    LL         
Sbjct: 254 LFSAPQHVYTRRLIAAVPNPAVRLLDETTPSPHPLLTLSDITIQYGHHRLLNKLLKRQSH 313

Query: 254 -FTCPNGFKL--YAGEIVTLIGDNGSGKTSLLKTLAGALSLKQRLPLK---VLGRRPKLG 307
                N   L  + GEI+ ++G++GSGK++L K + G +     L  +   + GR     
Sbjct: 314 QTRAANAVSLTVHEGEILGIVGESGSGKSTLAKAITGLVPFSGELDFRGYTLPGRSQMDK 373

Query: 308 VYGAELGLLMQRPSRQLFETTVLAEM------QFSLKRFELPCERAAQLLEELDL-NHLA 360
            Y   + ++ Q P   L     + ++       + L   E   +  A+LLEE+ L   +A
Sbjct: 374 DYRRRVQMIFQHPDASLNPRMRIGDIIARPLRLYGLPNGETETQAVARLLEEVRLPASMA 433

Query: 361 ELPPHQLSYGQQHLIALASLACMRPKVLLLDDPLAGMDKHYSSKVWYLLQKLTAQ-GCAI 419
              PH+LS GQ+  +A+A      P++++ D+  A +D    + V  LL +L  + G A 
Sbjct: 434 SRYPHELSGGQKQRVAIARAFAHPPELVICDEITAALDVSVQATVIELLLELRRRYGTAY 493

Query: 420 LLTSHRKIPRDQISRQLH-LHHGQLFEDVP 448
           L  +H      Q++ ++  ++ G + E +P
Sbjct: 494 LFITHDLNLIQQVAHRIAVMYRGDVLEILP 523