Pairwise Alignments

Query, 335 a.a., NAD dependent epimerase/dehydratase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 326 a.a., nucleoside-diphosphate sugar epimerase from Magnetospirillum magneticum AMB-1

 Score =  336 bits (861), Expect = 5e-97
 Identities = 173/335 (51%), Positives = 224/335 (66%), Gaps = 13/335 (3%)

Query: 1   MKYLVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKL 60
           M  LVTGAAGFIG + S RL A G  V+G+D L+ YYDV LK  RL  L     F F++ 
Sbjct: 1   MTILVTGAAGFIGYHTSLRLLARGERVLGVDCLSPYYDVRLKQTRLEHLRKHEGFSFVQA 60

Query: 61  DLADREGIAKLFAQQG-FQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHH-K 118
           D+ADR  + ++          I+LAAQAGVR+SL  P  Y  SN+ GHL +LE  R + K
Sbjct: 61  DIADRAAMQQVATSNPEVTDYINLAAQAGVRHSLTAPFDYTHSNIEGHLVMLEMARANPK 120

Query: 119 IEHLVYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLR 178
             H VYASSSSVYG N K+PFS ED VD PISLYAA+K++ ELMSH+YSHL+++PTTGLR
Sbjct: 121 CRHFVYASSSSVYGANTKLPFSVEDRVDTPISLYAASKRSGELMSHSYSHLFRVPTTGLR 180

Query: 179 FFTVYGPWGRPDMALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQDKPPSP 238
           FFTVYGPWGRPDMA + F  AI+AG+ I V+N+GD+ RDFTYIDDIV G++ V D PP+ 
Sbjct: 181 FFTVYGPWGRPDMAAYLFADAIIAGQPIKVFNNGDMRRDFTYIDDIVSGVVGVLDNPPAD 240

Query: 239 TPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKKQFLPMQPGDVHA 298
                         + PYR++NIGN +  +L+DFI  +E +LG +A   F PMQPGDV  
Sbjct: 241 D-----------GKAPPYRLYNIGNNNSEKLMDFIGLVESSLGRKATYDFHPMQPGDVKE 289

Query: 299 TWADTEDLFKAVGYKSQVDIDTGVAKFVDWYRNFY 333
           T+AD   + + VG+     I  GV +F++WY+ ++
Sbjct: 290 TYADISAIQRDVGFAPATPISVGVPRFIEWYKQYH 324