Pairwise Alignments

Query, 335 a.a., NAD dependent epimerase/dehydratase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 341 a.a., NAD dependent epimerase/dehydratase from Magnetospirillum magneticum AMB-1

 Score =  140 bits (354), Expect = 4e-38
 Identities = 102/323 (31%), Positives = 155/323 (47%), Gaps = 34/323 (10%)

Query: 4   LVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKLDLA 63
           LVTG AGFIG+++  RL A GH V  IDN  +  +  L  A+ +  + L+     + D+A
Sbjct: 11  LVTGGAGFIGSHLVDRLLADGHRVSVIDNFANGREENLADAKASAPDRLTVH---RADVA 67

Query: 64  DREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIEHLV 123
           D + I  +FA  G   V HLAA A +  S+ +P+ Y  +N+ G + +LE  R   ++  V
Sbjct: 68  DADIIRPMFA--GVDWVFHLAAMADIVPSIQDPMLYHRANVDGTIAVLEAARAAGVKRFV 125

Query: 124 YASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRFFTVY 183
           Y +SSS YG+ +  P + E +   P+  YA TK   E     ++  Y L    LR F VY
Sbjct: 126 YTASSSCYGIPETYP-TPETAAPSPMYPYALTKWVGEQYVMHWAQTYDLAAVSLRLFNVY 184

Query: 184 GPWGRPD---MALF-KFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQDKPPSPT 239
           GP  R      A+F  F    LAG+   V   G  +RDFT++ D+ +  +          
Sbjct: 185 GPRHRTAGTYGAMFGVFLAQRLAGKPYTVVGDGSQTRDFTFVADVADAFV---------- 234

Query: 240 PDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKKQFLPMQPGDVHAT 299
                   T ANS     +FN+G+     +   I  L         K  +P +PG+   T
Sbjct: 235 --------TAANSKISGEIFNVGSDGTYSVNRIIEIL------GGDKLHIPKRPGEPDCT 280

Query: 300 WADTEDLFKAVGYKSQVDIDTGV 322
           WAD   + + +G+K +V ++ GV
Sbjct: 281 WADIAKIKRVLGWKPKVSLEEGV 303