Pairwise Alignments

Query, 293 a.a., sulfate ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 272 a.a., sulfate ABC transporter, permease protein CysT from Pseudomonas sp. S08-1

 Score =  318 bits (816), Expect = 6e-92
 Identities = 149/259 (57%), Positives = 202/259 (77%)

Query: 28  VLPGFGITLGFSVLYLSLLFLLPVAGLILFTLQMSWADFWVAISHPQVVASYKLSFAASF 87
           V+PGFG+TLG++++YLSLL L+P+  + +   Q+SW   W  ++ P+V+A+ KLSF+ + 
Sbjct: 8   VIPGFGLTLGYTLVYLSLLVLIPLGAMFVHAAQLSWEQIWTIVTAPRVLAALKLSFSTAL 67

Query: 88  IGATINAVFGTLVAWVLVRYQFLGKKVVDALVDLPFALPTAVAGIALVTLYSTTGWVGQY 147
             A +N + GTL+AWVLVRY F G+K++DA++DLPFALPTAVAGIAL  LY+  G VGQ 
Sbjct: 68  AAAVLNGIIGTLLAWVLVRYDFPGRKLIDAMIDLPFALPTAVAGIALTALYAPAGLVGQI 127

Query: 148 LYLWGIKVAYSEIGVVIALTYIGLPFVVRTVQPVLADFSKELEEASASLGASRFTTIKRV 207
               G K+AY+ +G+ +ALT++ LPFVVRT+QPVLAD  +E+EEA+A LGA  F   + +
Sbjct: 128 ATWLGFKIAYTPLGITLALTFVTLPFVVRTIQPVLADIPREVEEAAACLGAKPFQVFRHI 187

Query: 208 ILPAVLPALLTGYALAFARAVGEYGSVIFISGNLPYRTEITPLLIVSKAEQYDYNGAAAI 267
           ++PA+LPA LTG+ALAFAR VGEYGSVIFI+GN+P +TEI PLLI+ K +QYDY+GA  I
Sbjct: 188 LVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYHGATTI 247

Query: 268 GVVMLAAAFILLLIINSLQ 286
           GV+ML  +FILLL+IN LQ
Sbjct: 248 GVLMLVVSFILLLLINLLQ 266