Pairwise Alignments

Query, 305 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 410 a.a., hypothetical protein from Kangiella aquimarina DSM 16071

 Score =  130 bits (326), Expect = 7e-35
 Identities = 84/262 (32%), Positives = 135/262 (51%), Gaps = 25/262 (9%)

Query: 7   AIATTAYVKAMALAGALLASTMVSAQPSDESNLEPFSAASIGMMKNTDAEQAAKQEQQAL 66
           +I+ T     + L+  L A   V+ +P  + +         G    T  E   K+  +  
Sbjct: 2   SISKTLVPLGVTLSAILFAGQAVADEPQVKIS---------GKSATTSVEMQQKETGEVA 52

Query: 67  SLLQQSAPAQNVKQSTAAALKSLTPSFSAQGANVSRVQLMGATPMTREQVIAKHTSQPIP 126
           +   +   A N  ++++ + K +T    A+     +++L   T  TR ++ A+ ++ P  
Sbjct: 53  NKTDKVPAASN--RTSSYSSKQVTTDLKAE----LQLELDKTTAKTRSEMRAQKSNLPEK 106

Query: 127 SSSATTEDPYRAPIYHSFAIYDASSRLFEDFDYDGFYRTFSVTFDVDVFGSYLNERADLF 186
           S  + +         +   +YD S  L ED+D DG+Y   SV FDVD   +Y NE  D++
Sbjct: 107 SEKSLSSG------MNHLYVYDGSVYLSEDYDGDGYYTKLSVNFDVD---AYYNEYYDVY 157

Query: 187 AELYLSRNG-GPWVHYYTTGVFTIYGDSTQDDYEVLTTLYTGYQTDHYDVLIDVYEVGYS 245
           AE+++ +NG   W HYYTT VFTIYGD++ DDY V T L +G+    Y+VLID++E GYS
Sbjct: 158 AEMFIRKNGDSEWTHYYTTDVFTIYGDNSSDDYTVTTKLNSGFPPGRYEVLIDLFEYGYS 217

Query: 246 GIVASISADNTDGLYALPLESR 267
           G+V + S  +   L  LPLE +
Sbjct: 218 GVVDTYSEYDDADLGWLPLEDK 239



 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 13/159 (8%)

Query: 151 SRLFEDFDYDGFYRTFSVTFDVDVFGSYLNERADLFAELYLSRNGGPWVHYYTTGVFTIY 210
           + ++ D D DGFYR F+++FDVD   S      D++A LY    G  W +   T V T+ 
Sbjct: 257 TEIWTDSDNDGFYRDFTISFDVDTEQS----SRDVYAILYQRVPGYSWEYETETAVLTVV 312

Query: 211 GDSTQDDYEVLTTLYTGYQTDHYDVLIDVYEVGYSGIVASISADNTDGLYALPLESRDRD 270
           G S  D   +     +GY TD+YD  I++ +     ++  +S++    L  +PLE   RD
Sbjct: 313 GASADDVISIDAEWQSGYPTDYYDFRIELIDADTGEVLDDVSSE-FSSLLEVPLEDAGRD 371

Query: 271 SSGEVIIV--------DEGGAFSFFALLGLGLWAVLRKR 301
           +    +            GG++S   L  LGL+A  R+R
Sbjct: 372 TRSTTVTPPPSSTSYGSGGGSWSLLGLSLLGLFAWFRRR 410