Pairwise Alignments

Query, 455 a.a., DNA-damage-inducible protein F (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 445 a.a., DNA-damage-inducible protein F from Agrobacterium fabrum C58

 Score =  231 bits (589), Expect = 4e-65
 Identities = 145/430 (33%), Positives = 214/430 (49%), Gaps = 26/430 (6%)

Query: 18  NRQLFALALPMILSNITVPLLGLVDTAVIGHLSDAYYLGGVALGSTIITLIIWLLGFLRM 77
           +R +  +A+PM+++ ++ PL+GLV T VI H+ +   +GGVAL S I  +I     FLR 
Sbjct: 20  HRDVLKIAIPMMIAYLSTPLVGLVATGVIAHMRNEALVGGVALASVIFDVIFVTFNFLRG 79

Query: 78  ATTGLVAQAYGANDINAQLKLLVQGAMLATGLGIAMILLQVPLLSLALSFSEASVEVERY 137
           ATTG  AQA GA D   + ++L+ G ++A   G+ ++LL+ P+ +L +S   A   V   
Sbjct: 80  ATTGFTAQAMGAGDRVGEQRMLLSGLIIALVAGLLLLLLKGPIGALGMSVMGADGIVAEV 139

Query: 138 CREYFQIRIWSTPFALLNLVMLGWLLGRQQPKAAMWQLI---FANVANIILDVLFVLGFG 194
              YF  RIWS PF L N V  GWL+GR +   AMW +I     N  N  L V +V+G G
Sbjct: 140 ASTYFHWRIWSAPFVLFNFVAFGWLIGRGE---AMWSMILQTLLNGLNAALSVHWVIGLG 196

Query: 195 WGVKGAALASVFADITAFSVALYMVL----QQVKLIPNYPFAEIRAHIRFTGFGQLLRLN 250
           WGV+G A+A++ A+         ++L    +    +P+ P              +   +N
Sbjct: 197 WGVEGVAIATLVAEAVTAVAGAALILGKTDRSAWRLPDIP-----------AIRRSFEVN 245

Query: 251 SDIFIRSLCLQTAFAFMTFHGAGLGDNTVAANAVLLNLLLLISYALDGIAYYAEAEVGKA 310
            D+ IRS  L    +F T     LG   +AAN +LL         LDG+A  AE   G+A
Sbjct: 246 GDMMIRSFALLIGLSFFTRQSGFLGIEVLAANTILLRFYFFGVAFLDGVATAAEQLAGRA 305

Query: 311 YGQKRAQQLHEAVVLAWCWSAITALGFTLIFSLWGSHIIELLTSIDEVRTTAQIYLIWLV 370
            G          + L   W  I A   +L F   G  +I L    D V   A  YLI++V
Sbjct: 306 VGAHYRPAFDRTIKLTTLWGGIFAALVSLAFLAGGDWVIALTAPTDIVARLADSYLIYVV 365

Query: 371 LLPLWSFSSYLFDGVYIGAAQGKVMRNSMIIATFGAFFPTWYLLQSLLPSEQANHALWAA 430
           +LP+    ++  DGVYIG+   + MRN M+++    +F  W +LQ L      N  LW +
Sbjct: 366 VLPVIGIIAFQMDGVYIGSTWSRQMRNLMVVSLI-IYFAAWAVLQPL----YGNDGLWIS 420

Query: 431 MTAFMLMRSL 440
           +  F   RS+
Sbjct: 421 LLLFQGARSI 430