Pairwise Alignments

Query, 685 a.a., ferric vibriobactin receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 715 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

 Score =  108 bits (271), Expect = 7e-28
 Identities = 159/624 (25%), Positives = 261/624 (41%), Gaps = 86/624 (13%)

Query: 13  AIVSSLLISSAYAA-----ADAESSEPIERITVYGEKIERSLKDTTSSISVIDKETLDSG 67
           A+  S  + +AYAA     A AES E +  +TV     + S KD    +SVID +TL++ 
Sbjct: 26  ALGLSSQMCTAYAADYQPEASAESIE-LAPLTVSARLSQESAKDIPFGLSVIDGKTLETR 84

Query: 68  QYQSTSSALSEVPNVVVLS-GSVPDIR-GVSGNGSASGFNSFTGGARARVSTLVDGVAEP 125
           + ++   AL   P V V S G   D    + G GS +  +   G     V  +   V   
Sbjct: 85  RLRTLEDALRTTPGVEVNSWGGANDANVRIRGVGSLNQMSMDDGSVVLNVDGVPMSVRNA 144

Query: 126 FVADLSGDTGLWDIQQIEVFRGPQSTINGRNSIGGTVFIKTEDPTFDWQGAARVGYRDQD 185
            +A L       D+QQ+EV +GPQ T+ GRNS  G + + T  PT + +G  R    +Q 
Sbjct: 145 ALATL-------DVQQVEVLKGPQGTLLGRNSEAGAINVTTRKPTRELEGYVRGEVGNQG 197

Query: 186 NFIDSAVMLSGPILDDELAFRVSGQNVTGETYNKGLEYPTNPATFDQNELITNRWRGKFL 245
            F+     + GP L D LA R++                   + FD    + ++  G  L
Sbjct: 198 QFMTEGA-VGGP-LTDSLAGRIA----------------VRRSGFD--NWVDDQQDGDPL 237

Query: 246 WQPSAIEDLKVLYSLSYNDEKGDSG--------RNYFTGDD---PWAYKPIFQRYIET-- 292
            +P    DL +  SL +++++G +G          ++ G +   P+  +P       T  
Sbjct: 238 TKP---RDLALRGSLLWDNDQGTTGLLTAERQRAEHYAGLELLRPFGNRPSLDYTPGTFD 294

Query: 293 ----KSTTHSVKVDYELGEGQAFDLIVAY--MDYNWGFESYEALATAQQY---------V 337
                +  +S +++++L + +    I AY   D+N   + Y+   T   Y          
Sbjct: 295 GNQKTNERYSFELNHDLAQSR-ITSISAYTSTDFN-AVKGYDRNITRALYGSAFEYLIED 352

Query: 338 DMKDKSYTVDGKYSFGLKDKDFNGFVGLAYFKRSQDFGS---TGSSIYSGDDSTKSASVY 394
              ++ ++ D +    L D D     GL   +  + F S   T  +    D ST S + Y
Sbjct: 353 SAHERVWSQDLRLG-SLADADVFWVTGLNLSRSERSFDSNNLTNGAQQLRDFSTNSYAAY 411

Query: 395 GEVTYGLADSLWITVGGRVMREEQLRNFTMLYQGSQLLEKLDDANTVTLPKLVLQYALND 454
           GEVTY +A+   +T G R   + +         G+ + +     +  +  ++ L YAL  
Sbjct: 412 GEVTYPIAEDWKLTTGLRHTWDRKTYGGDYSTGGALVSDSRRLQDNYSTGRVALSYALTP 471

Query: 455 NTTLAASVRRGYNSGG---GALSLVESEYYYYDEEFVNTYELSSRSAFANGDVNLSANLF 511
            T + A + RGY S G    A S+ +SE Y   +  VN+ EL  +   A GD++L   LF
Sbjct: 472 QTNVYAVLSRGYKSAGFNDYATSVKDSEPYKAAK--VNSAELGFKHESAGGDLSLEGALF 529

Query: 512 YNDFD-----GYQASNSARKITNIDKAVSYGVEAEFSAMLTENWQFISGVGLLDSEIKQA 566
                     GY  +  A    N D   S G E   +  +T+     S V   ++ +   
Sbjct: 530 ITRVQDDHLLGYDFNTLAVSAVNADTR-SKGAELSTTWHVTDELTLGSAVSYTNAVVTSD 588

Query: 567 DP--SYGDI-IGNQLNSAPHVTAN 587
            P  S GD+  G+++   P  + N
Sbjct: 589 APGVSGGDVAAGSRVPDVPLWSGN 612