Pairwise Alignments

Query, 685 a.a., ferric vibriobactin receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 707 a.a., TonB-dependent receptor from Serratia liquefaciens MT49

 Score =  265 bits (678), Expect = 4e-75
 Identities = 199/660 (30%), Positives = 309/660 (46%), Gaps = 36/660 (5%)

Query: 10  TIAAIVSSLLISSAYAAADAESSE---PIERITVYGEKIERSLKDTTSSISVIDKETLDS 66
           ++ ++ ++ +      AAD++ ++     E + V GEKI+RS+ DT SS+ V D E + +
Sbjct: 38  SVGSVNAAAVDDKVQEAADSKRNDNWQDSESLLVTGEKIKRSIFDTGSSVQVFDSERIAA 97

Query: 67  -GQYQSTSSALSEVPNV--VVLSGSVPDIRGVSGNGSASGFNSFTGGARARVSTLVDGVA 123
                     L    NV  V +   +P +RG+ G+G  +G N+F  G R R++  +DG +
Sbjct: 98  MPNALQIPDLLRMTANVMDVGIGNDLPTVRGIDGSGPNTGANAFLSGTRPRLNLSLDGRS 157

Query: 124 EPFVADLSGDTGLWDIQQIEVFRGPQSTINGRNSIGGTVFIKTEDPTFDWQGAARVGYRD 183
             +     G   LWD+ ++EVF GPQS I GRN+I G + + ++DPTFDW+ A + G  +
Sbjct: 158 LTYNEQAYGPQSLWDLDRVEVFLGPQSYIQGRNAIAGAIVMASKDPTFDWESAFKGGAGN 217

Query: 184 QDNFIDSAVMLSGPILDDELAFRVSGQNVTGETYNKGLEYPTNPATFDQNELITNRWRGK 243
           Q +   SA M+SGP+++D+LAFRVS   V  +     ++ P      D  E+     R K
Sbjct: 218 QHSSQLSA-MVSGPLVEDQLAFRVS---VDRQRRRSDVDLPAYEPVGDPREVEATTARAK 273

Query: 244 FLWQPSAIEDLKVLYSLSYNDEKGDSGRNYFTGDDPWAYKPIFQRYIETKSTTHSV-KVD 302
            L+ P+ + +L    + ++         +      P + +   +R +   +T   V  + 
Sbjct: 274 LLFNPAGLRELTTKLTFNHFGSTSPQNESLNPLVHPTSLRHDPRRAVFKSNTNSGVWDLS 333

Query: 303 YELGEGQAFDLIVAYMDYNWGFESYEALATAQQYVDMKDKSYTVDGKYSFGLKDKDFNGF 362
           +E  +    +  V Y D+N         A A  Y D+  K   V+    FG  D    G 
Sbjct: 334 WEQSDSLTLENRVIYTDFNIN----RPTAYALPYADIGGKEVHVEPVARFGGPDSRLRGL 389

Query: 363 VGLAYFKRSQD--FGSTGSSIYSGDDSTKSASVYGEVTYGLADSLWITVGGRVMREEQLR 420
            GL YF   QD      G S +   D T + S + E+TY +   + IT   R+ RE + R
Sbjct: 390 AGLRYFHSKQDEFVNIFGGSTFK--DKTDTNSAFAELTYAITPKVDITAASRLEREHRQR 447

Query: 421 NFTMLYQGSQLLE-KLDDANTVTLPKLVLQYALNDNTTLAASVRRGYNSGGGALSL-VES 478
                  GS+ +    D+   V LPKL L +   D  T  A V RGYN+GG  +++    
Sbjct: 448 T-----GGSKAVRIDFDETYDVFLPKLDLAWKPTDTQTYGAKVARGYNAGGAGITIGTPV 502

Query: 479 EYYYYDEEFVNTYELSSRSAFANGDVNLSANLFYNDFDG----YQASNSARKITNIDKAV 534
             Y Y  E+V  YEL +R    + +V L++N+FYND+      Y    ++  I N DK  
Sbjct: 503 VNYTYGSEYVWNYELYTRHHLKDANVILTSNIFYNDYKDMQLPYSLGPNSSVIRNADKVE 562

Query: 535 SYGVEAEFSAMLTENWQF--ISGVGLLDSEIKQADPSYGDIIGNQLNSAPHVTANAGLKY 592
           +YG  AE  A     W F   + VGLL ++IK+   S  D  G++L  AP  TAN G KY
Sbjct: 563 TYG--AEMGATWQPRWDFELFTNVGLLKTKIKKFSGSGVD--GHELARAPAYTANMGAKY 618

Query: 593 WLSDAFSFGFAGHYVGEYFADINNTESRVAGDYVVARVSLDYQTDSWRVSGFVNNLFDEQ 652
            L           +   Y++  +N      G Y  A   L Y     R + +  NLFD +
Sbjct: 619 QLMAGLELSGNVAFSDSYYSQYDNDSRGRIGSYWSANTQLAYTFAYGRATLYAQNLFDSE 678