Pairwise Alignments

Query, 685 a.a., ferric vibriobactin receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 731 a.a., Outer membrane receptor proteins, mostly Fe transport from Kangiella aquimarina DSM 16071

 Score =  130 bits (326), Expect = 3e-34
 Identities = 168/764 (21%), Positives = 309/764 (40%), Gaps = 120/764 (15%)

Query: 4   KAFKKSTIAAIVSSLL--ISSAYAAADAESSEPIERITVYGEKIERSLKDTTSSISVIDK 61
           ++FK   + ++++  L  ++   A AD +  + IE + +  E +  S     SS++V+D 
Sbjct: 6   RSFKPLVLTSLLAMSLGALADEQALADEQMDDDIETLVINAEHLTESPLTLPSSVTVVDS 65

Query: 62  ETLDSGQYQSTSSALSEVPNVVVLSGSVP----DIRGVSGNGSASGFNSFTGGARARVST 117
           ET          + L+  PNV   +G+       IRGV         + F       V  
Sbjct: 66  ETARKNNAYHLDNILNLAPNVNFATGASRGRFIQIRGVGER------SEFVEPVNYSVGL 119

Query: 118 LVDGVAEPFVADLSGDTGLWDIQQIEVFRGPQSTINGRNSIGGTVFIKTEDPTFDWQG-- 175
           +VDG+    +  ++G   + D QQ+E+ RGPQ T+ G N++ G + + +  P  D     
Sbjct: 120 IVDGID---MTGIAGGALMLDTQQVEILRGPQGTLYGANALAGLINMVSAAPEEDLLKFT 176

Query: 176 AARVGYRDQDNFIDSAVMLSGPILDDELAFRVSGQNVTGETYNKGLEYPTNPA-TFDQNE 234
           A+   Y  +     SA ++S   L D L +R++      + Y   +    +    +D++ 
Sbjct: 177 ASLESYSGR-----SASLISSDQLSDSLGYRIAVGQYRSDGYTDNIFLGRDDTQNYDESS 231

Query: 235 LITNRWRGKFLWQPSA------------IEDLKVLYSL-----SYNDEKGDSGRNYFTGD 277
           L     +G+ ++QP              +++    +SL     +Y+DE G   +      
Sbjct: 232 L-----KGRLVYQPDDSFSLTSNLIFVDVDNGYDAFSLDNTRQTYSDEPGHDRQETIGAS 286

Query: 278 --DPWAYKPIFQRYIETKSTTHSVKVDYELGEGQAFDLIVAYMD-------YNWGFESYE 328
               WA+       +++  +    ++DY   E  +   I            ++W + S++
Sbjct: 287 FIAEWAWD---STKLQSTLSFADSELDYAYDEDWSHTGICEGTPCDSDDWGFDWWYSSFD 343

Query: 329 ALATAQQYVDMKDKSYTVDGKYSFGLKDKDFNGFVGLAYFKRSQDFGSTGSSIYSGDD-- 386
                 + + +  K   + G+   G  D   N +V  AYF R Q         ++  D  
Sbjct: 344 RFLRDNRNLSLDMK--LIGGQ---GSTDTLSNQWVVGAYF-RDQSVDLLRQYTFNPVDFR 397

Query: 387 ---STKSASVYGEVTYGLADSLWITVGGRVMREEQLRNFTMLYQGSQLLEKLDDANTVTL 443
               T++A++YG++   L ++  +  G R  R+      T  Y  +Q     + +     
Sbjct: 398 NQYDTRNAALYGQLDIPLNNAWTLASGLRYERQ------TADYNDNQPFAD-ERSENFWG 450

Query: 444 PKLVLQYALNDNTTLAASVRRGYNSGG--GALSLVESEYYYYDEEFVNTYELSSRSAFAN 501
            K+ L+Y  N+ T L A + RGY +GG   A  L ES+  Y D E++  +EL  +  + +
Sbjct: 451 GKVSLEYQANEQTMLYALLSRGYKAGGFNTAQELPESQREY-DSEYMLNHELGVKGMWPD 509

Query: 502 GDVNLSANLFYNDFDGYQASNS-------ARKI--------------TNIDKAVSYGVEA 540
               L A++FY + D  Q+  S        R +               N   A SYG E 
Sbjct: 510 AGFTLQASVFYQNRDDIQSKQSYVTSQADGRTLQEGGECPCNFTDYNINAGGAKSYGAEV 569

Query: 541 EFSAMLTENWQFISGVGLLDSEIKQAD-------------PSYGDIIGNQLNSAPHVTAN 587
           E++    +   F   +G+L +E +                P   D+ G +L  +P +   
Sbjct: 570 EWNWRSLDWAHFYGSMGILKTEFENLQSFTHVLADLTANPPVPYDLTGRELAHSPELQWV 629

Query: 588 AGLKYWLSDAFSFGFAGHYVGEYFADINNTESRVAGDYVVARVSLDYQTDSWRVSGFVNN 647
            G  ++LSD +S      +  E++  +++     A DY +  ++L Y+   W +  +  N
Sbjct: 630 LGADFYLSDYWSLNLQTEFKDEFY--LSDRHQVKADDYQLWHLALTYEDTHWLLEFYGRN 687

Query: 648 LFDEQAMT------VNEPASRSYPDGYAAIIDPRNIGVSAMYRF 685
           L DE  +        N+P      + Y     PR +GV A Y F
Sbjct: 688 LTDETVVNRGFGSFGNDPRKFYETEPYFQYGTPRIVGVRAAYSF 731