Pairwise Alignments

Query, 685 a.a., ferric vibriobactin receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 742 a.a., TonB-dependent receptor from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  119 bits (297), Expect = 7e-31
 Identities = 155/635 (24%), Positives = 249/635 (39%), Gaps = 99/635 (15%)

Query: 1   MKCKAFKKSTIAAIVSSLLISSAYAAADA----ESSEPIERITVYGEKIERSLKDTTSSI 56
           +KC     +    +  + +   A AAA A    +S+  ++ I V   + +  LKD   ++
Sbjct: 5   VKCALLAGAAWGVLAGATVAQDAEAAAQAANADQSAATVDDIVVTARRRDEQLKDVPIAV 64

Query: 57  SVIDKETLDSGQYQSTSSALSEVPNVVVL------SGSVPDIRGVSGNGSASGFNSFTGG 110
           S +  E L+     + ++   + PN  V       S  +  IRGV       GF    G 
Sbjct: 65  SALSAERLEQTGAVNITALQQQTPNATVQIARGSNSTLISFIRGVGQQDPLWGFEPGVG- 123

Query: 111 ARARVSTLVDGVAEPFVADLSGDT-GLWDIQQIEVFRGPQSTINGRNSIGGTVFIKT--- 166
                   VD V   +VA   G    ++DI +IEV RGPQ T+ GRN+IGG +   T   
Sbjct: 124 ------LYVDDV---YVARPQGAVLDIFDISRIEVLRGPQGTLYGRNTIGGAIKYVTKRL 174

Query: 167 -EDPTFDWQGAARVGYRDQDNFIDSAVMLSGPILDDELAFRVSGQNVTGETYNKGLEYPT 225
            +DP+      A VG  ++ NF+     LSG +   +  F + G   T      G    T
Sbjct: 175 GQDPSLT--ARAEVGAYNEHNFL-----LSGSVPVGQ-TFAIGGAVATYNHDGYGKNLNT 226

Query: 226 NPATFDQNELITNRWRGKFLWQPSAIEDLKVLYSLSYNDEKGDSGRNYFTGDDPWAYKPI 285
               +D++      +R    W P+     ++ +    ++     G    T  D     P 
Sbjct: 227 GKDQYDKD---VTAYRASAEWTPNDNLFFRLAWDRVEDNSSPRHGHREVTSTDGLWRAPA 283

Query: 286 --FQRYI----ETKSTTHSVKV--DYELGEGQAFDLIVAYMDYNWGFESYEALATAQQYV 337
             +  Y     E K  T  V +  +Y + +      I AY   +         AT   + 
Sbjct: 284 GKYDTYAGITGEQKVVTEGVALTGEYRVNDMLTLKSISAYRSGD--------TATIIDFD 335

Query: 338 DMKDKSYTVDGKYSFGLKDKDF---------NGFVGLAYFKRSQD------FGSTGSSIY 382
              + +  V   Y+     ++F         +G  G+ Y   +         G+ G SI 
Sbjct: 336 QTPNPTLDVPAIYADHQFSQEFQALFTGERWSGVAGVYYLDGTSSGVFDTIAGNLGLSIA 395

Query: 383 S-GDDSTKSASVYGEVTYGLADSLWITVGGRVMREEQ----LRNFTMLYQGSQLLEKLDD 437
           + G   TKS S++G+ +Y L D L +++GGR  R+++    LR F +    S L      
Sbjct: 396 AAGSVDTKSFSIFGDFSYDLTDRLHLSLGGRYTRDDKDAAVLRQFYLGATRSPLTGGTPR 455

Query: 438 ANTVT-------------LPKLVLQYALNDNTTLAASVRRGYNSGG----GALSLVESEY 480
           A   T              P+  + Y  +D  T  ASV +G+ SGG    G  +LV    
Sbjct: 456 AVFATRTNYTASDTFEKFTPRASISYDFSDEITGYASVSQGFKSGGWDMRGDAALVPQTV 515

Query: 481 YYYDEEFVNTYELSSRSAFANGDVNLSANLFYNDFDGYQ----------ASNSARKITNI 530
             Y  E V TYE+  + +  +  +N ++ +FY+D+   Q          A   A  + N 
Sbjct: 516 NGYQPETVTTYEVGLKGSAFDRRMNFASAIFYSDYKDQQITTQQVATPPAVGIASVVDNA 575

Query: 531 DKAVSYGVEAEFSAMLTENWQFISGVGLLDSEIKQ 565
             +  YG E E SA LT +      VG L +E  +
Sbjct: 576 GASTIYGFELEGSAYLTSDITANFSVGYLKNEFDE 610