Pairwise Alignments

Query, 327 a.a., formate dehydrogenase, C subunit, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 211 a.a., formate dehydrogenase-O, cytochrome b556 subunit from Escherichia coli BL21

 Score = 72.4 bits (176), Expect = 9e-18
 Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 13/197 (6%)

Query: 124 HWLGAIPCLLLILTGLVLLAGRFFFQPWLGEGFWAGLVYGAKQVHDVMAIPFMIGWALMI 183
           HW+ A   +L  ++GL  L   F    WL +    G    A+ +H  + +     + +M 
Sbjct: 18  HWITAFCFILAAVSGLGFLFPSF---NWLMQIM--GTPQLARILHPFVGVVMFASFIIMF 72

Query: 184 TLWAKNQLPKMYDVKWFMVVGGYINFGPFKGKHPDAGFANAGEKMWFWAFALFGLIISAS 243
             +  + L    D+ W   +   +       +  D G  N G+K  FWA  +F +++  S
Sbjct: 73  FRYWHHNLINRDDIFWAKNIRKIV----VNEEVGDTGRYNFGQKCVFWAAIIFLVLLLVS 128

Query: 244 GMLLLFPNLFEPSRTLSLI--ALVLHSVSAIVICAFSIVHIFMATVMSEGGMECMVSGYC 301
           G+++  P  F P+ ++ +I  AL+LHS +A+ +    +VHI+ A +  +G +  MV G+ 
Sbjct: 129 GVIIWRP-YFAPAFSIPVIRFALMLHSFAAVALIVVIMVHIY-AALWVKGTITAMVEGWV 186

Query: 302 DENWASQHHNLWFDEIK 318
              WA +HH  W+ E++
Sbjct: 187 TSAWAKKHHPRWYREVR 203



 Score = 24.6 bits (52), Expect = 0.002
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 224 AGEKMWFWAFALFGLIISASGMLLLFP--NLFEPSRTLSLIALVLHSVSAIVICAFSIVH 281
           A E++  W  A   ++ + SG+  LFP  N          +A +LH    +V+ A  I+ 
Sbjct: 12  APERINHWITAFCFILAAVSGLGFLFPSFNWLMQIMGTPQLARILHPFVGVVMFASFIIM 71

Query: 282 IF 283
            F
Sbjct: 72  FF 73