Pairwise Alignments

Query, 189 a.a., formate dehydrogenase, iron-sulfur subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 328 a.a., hydrogenase 2 4Fe-4S ferredoxin-type component from Escherichia coli BL21

 Score = 95.5 bits (236), Expect = 9e-25
 Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 38/201 (18%)

Query: 3   TMKFLCDTKRCIECNGCVTACKN---------------ENDSALEWGIQRRRVVTINDG- 46
           ++  L D+  C+ C  CVT C++                ND    +     +V T   G 
Sbjct: 37  SLGMLYDSTLCVGCQACVTKCQDINFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGV 96

Query: 47  -----KPGEASISVACMHCSDAPCMAVCPANCFYKT-EDGIVLHDKDTCIGCGYCLYACP 100
                + G A I   CMHC D  C++VCP +   K  + GIV +DKD C GC YC+ ACP
Sbjct: 97  NKDQEENGYAYIKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACP 156

Query: 101 FGAPQFPQKGAFGNRGKMDKCTFCAGGPEETHSEAERQKYGSNRIAEGKLPMCAELCATK 160
           +  P++     F   G + KC  C              + G  R+ +G LP C E+C   
Sbjct: 157 YNVPKYDYNNPF---GALHKCELC-------------NQKGVERLDKGGLPGCVEVCPAG 200

Query: 161 ALLAGDAEVVSNIFRERVAYR 181
           A++ G  E +    ++R+A +
Sbjct: 201 AVIFGTREELMAEAKKRLALK 221