Pairwise Alignments

Query, 342 a.a., formate dehydrogenase, C subunit, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 211 a.a., formate dehydrogenase cytochrome b556 subunit from Serratia liquefaciens MT49

 Score = 68.6 bits (166), Expect = 1e-16
 Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 20/213 (9%)

Query: 127 KMVVRWSKADLWIHWIMAISCLVLMFTGLTIMLGKHVVQELLGPDIWAPLIYGS----KT 182
           K + R+S  +   HWI+A   +    +GL                 W   I+G+    + 
Sbjct: 5   KRIQRYSAPERINHWIVAFCFVFAAISGLGFFFPSFN---------WLMNIFGTPQLARI 55

Query: 183 VHDWAGPIFIVSWIVCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGE 242
           +H + G I   ++++  +++         D+ W       I+      +  D+G  N G+
Sbjct: 56  LHPFVGVIMFAAFLLMFLRYWKHNLINREDIVW----AKNIHKIAMNEEVGDTGRYNFGQ 111

Query: 243 KMWFWTLTLFGLFISVSGIMLVLPGL--DLPREASMAALLIHSISAVILIAFTIVHIWMA 300
           K  FW   +  + +  SG+++  P      P      ALL+HS++AV LI   +VHI+ A
Sbjct: 112 KCVFWAAIISLVLLLASGVVIWRPYFAPSFPIPLIRIALLVHSLAAVGLIIVIMVHIY-A 170

Query: 301 TVLSEGGMECMKSGYCDENWAIQHHNLWYDEIK 333
            +  +G +  M  G+    WA +HH  WY E++
Sbjct: 171 ALWVKGTITAMVEGWVPAAWAKKHHPRWYREVR 203