Pairwise Alignments

Query, 342 a.a., formate dehydrogenase, C subunit, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 218 a.a., Formate dehydrogenase N gamma subunit (EC 1.2.1.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 20/214 (9%)

Query: 127 KMVVRWSKADLWIHWIMAISCLVLMFTGLTIMLGKHVVQELLGPDI-WAPLIYGS----K 181
           KM+VR    D   HW + I   ++  +G++             P + W    +G+    +
Sbjct: 5   KMIVRTKFVDRACHWTVVICFFLVALSGISFFF----------PTLQWLTQTFGTPQMGR 54

Query: 182 TVHDWAGPIFIVSWIVCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAG 241
            +H + G    ++ +   V+++        D+ W   +   +     + K  D G  NAG
Sbjct: 55  ILHPFFGIAIFIALMFMFVRFVHHNIPDKKDIPWLKNIVEVLKGN--EHKVADVGKYNAG 112

Query: 242 EKMWFWTLTLFGLFISVSGIMLVLP--GLDLPREASMAALLIHSISAVILIAFTIVHIWM 299
           +KM FW++      + V+G+++  P      P +    +LLIH+ + +IL+   ++H++M
Sbjct: 113 QKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILMHAILIHMYM 172

Query: 300 ATVLSEGGMECMKSGYCDENWAIQHHNLWYDEIK 333
           A  + +G ++ M  G     WA +HH  WY EI+
Sbjct: 173 AFWV-KGSIKGMIEGKVSRRWAKKHHPRWYREIE 205