Pairwise Alignments

Query, 342 a.a., formate dehydrogenase, C subunit, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 211 a.a., formate dehydrogenase cytochrome b556 subunit from Dickeya dadantii 3937

 Score = 72.8 bits (177), Expect = 7e-18
 Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 18/213 (8%)

Query: 129 VVRWSKADLWIHWIMAISCLVLMFTGLTIMLGK-HVVQELLGPDIWAPLIYGSKTVHDWA 187
           + R+S  +   HWI+A   +    +GL       + +  +LG    A ++      H + 
Sbjct: 7   IQRYSAPERINHWIVAFCFVFAALSGLGFFFPSLNWLMNVLGTPQLARIL------HPFV 60

Query: 188 GPIFIVSWIVCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEKMWFW 247
           G +  V++++  +++      +  DL+W   +           +  D+G  N G+K  FW
Sbjct: 61  GVVMFVAFLLMFLRYWKHNLIERSDLEWAKNIHKIAR----NEEVGDTGRYNFGQKCVFW 116

Query: 248 TLTLFGLFISVSGIML----VLPGLDLPREASMAALLIHSISAVILIAFTIVHIWMATVL 303
                 L +  SGI++      P   +P     AAL++HS+SAV LI   +VH++ A + 
Sbjct: 117 LAITCLLLLLASGIVIWRPYFAPSFSIP--VIRAALVVHSVSAVGLILTIMVHVY-AALW 173

Query: 304 SEGGMECMKSGYCDENWAIQHHNLWYDEIKANG 336
            +G +  M  G+    WA +HH  WY E+++ G
Sbjct: 174 VKGTITAMVEGWVSSEWAKKHHPRWYRELQSKG 206