Pairwise Alignments

Query, 342 a.a., formate dehydrogenase, C subunit, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 211 a.a., formate dehydrogenase-O, cytochrome b556 subunit from Escherichia coli BL21

 Score = 72.4 bits (176), Expect = 9e-18
 Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 18/210 (8%)

Query: 129 VVRWSKADLWIHWIMAISCLVLMFTGLTIMLGK-HVVQELLGPDIWAPLIYGSKTVHDWA 187
           +VR++  +   HWI A   ++   +GL  +    + + +++G    A ++      H + 
Sbjct: 7   IVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLMQIMGTPQLARIL------HPFV 60

Query: 188 GPIFIVSWIVCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEKMWFW 247
           G +   S+I+   ++         D+ W   +   +       +  D+G  N G+K  FW
Sbjct: 61  GVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIV----VNEEVGDTGRYNFGQKCVFW 116

Query: 248 TLTLFGLFISVSGIML----VLPGLDLPREASMAALLIHSISAVILIAFTIVHIWMATVL 303
              +F + + VSG+++      P   +P      AL++HS +AV LI   +VHI+ A + 
Sbjct: 117 AAIIFLVLLLVSGVIIWRPYFAPAFSIP--VIRFALMLHSFAAVALIVVIMVHIY-AALW 173

Query: 304 SEGGMECMKSGYCDENWAIQHHNLWYDEIK 333
            +G +  M  G+    WA +HH  WY E++
Sbjct: 174 VKGTITAMVEGWVTSAWAKKHHPRWYREVR 203