Pairwise Alignments

Query, 949 a.a., formate dehydrogenase, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1016 a.a., formate dehydrogenase-N subunit alpha from Dickeya dianthicola ME23

 Score =  256 bits (655), Expect = 4e-72
 Identities = 288/1086 (26%), Positives = 440/1086 (40%), Gaps = 228/1086 (20%)

Query: 20   LNRRQFLKSAGLATGGIAAASMLGTGMMRKAEAKDIPHNAPTEVKRTI--CSHCSVGCGV 77
            ++RRQF K   +  GG+A  ++   G    A   +         + T   C++CSVGCG+
Sbjct: 3    VSRRQFFK---ICAGGMAGTTVTALGFSPSAALAETRQYKLLRARETRNNCTYCSVGCGI 59

Query: 78   YA-EVQNGVWTGQEPAF------DHPFNQGGHCAKGAALREHGHGEKRLKYPMKLEGG-- 128
                + +G        +      DHP ++G  C KGA L +  H ++RLKYP     G  
Sbjct: 60   LMYSLGDGAKNASASIYHIEGDPDHPVSRGSLCPKGAGLVDFIHSDQRLKYPEYRAPGSD 119

Query: 129  KWKKISWDQAINEVGDKMMAIRQESGPD------------SIYFMGSAKFSNEQAYLYRK 176
            KW++ISW++A + +   M   R  +  +            +   + S+  SNE   L +K
Sbjct: 120  KWQRISWEEAFDRITRLMKKDRDANFVEKNAAGVTVNRWLTTGMLCSSAASNETGILDQK 179

Query: 177  FAALWGTNNVDHSARICHSTTVAGVANTWGYGAQTNSVNDIRHSKCILFVGSNPSEAHPV 236
            FA   G   +D  AR+CH  TVA +A T+G GA TN+  DI+++  IL +G NP+EAHPV
Sbjct: 180  FARALGMIGIDTQARLCHGPTVAALAPTFGRGAMTNNWVDIKNANVILVMGGNPAEAHPV 239

Query: 237  AMQHILVAK-ERGAKIIVVDPRFTRTAAKSDEYVHIRPGTDIPFIYGLL----------- 284
              +  + AK   GAK+IVVDPRF R+AA +D Y  IR G+DI F+ G++           
Sbjct: 240  GFKWAVEAKIHNGAKLIVVDPRFNRSAAVADMYSPIRAGSDITFLLGVVNYLLSYDKVQM 299

Query: 285  ----------------------------------------WHIFENGWEDKDFI---KRR 301
                                                    + + ENG+  +D      R 
Sbjct: 300  PYVKAYTNASLIVRDDYHFDEGIFSGYDEQKRQYDRTSWQYELDENGFAKRDDTLSHPRC 359

Query: 302  VYGMERIREEVKKYTPEEVENVVGAPKAQMYRVAKMMAET----KPGSIVWCMGGTQHHV 357
            V+ +  ++E   +YTP+ V NV G PK     + + +A T    +  +I++ +G TQH  
Sbjct: 360  VWNL--LKEHASRYTPDLVTNVCGTPKPDFLTICEQLASTCVPDRTATIMYALGWTQHTA 417

Query: 358  GNANTRSYCILQLALGNMGVTGGGTNIFRGHDNVQGASDFGLSFDDLPGYFGLTS----- 412
            G    R+  ++QL LGN+G+ GGG N  RGH N+QG +D GL   +LPGY  L S     
Sbjct: 418  GAQIIRTAAMIQLLLGNIGMAGGGVNALRGHSNIQGYTDLGLLSLNLPGYMPLPSEKQTS 477

Query: 413  -----------GSWAHWANVWDLDPKW------------VTSRFDQG-EYLGQSPQTSPG 448
                          A   N W   PK+             T   D G ++L +  ++   
Sbjct: 478  LNMYLDQITPKALLADQVNYWKNTPKFFISMMKSFWGNKATKENDWGYDWLPKWDKSYDA 537

Query: 449  IPCSRWHDGVLEDKTK--IAQKDNIRLAFFWGQSVNTETRGREVRQALDKMDTVVVVDPF 506
            +  SR    +L+ K    I Q  N   AF               R AL K+  +V++DP 
Sbjct: 538  LAYSRM---MLDGKVNGYIVQGFNPMAAF---------ADSNRARDALKKLKYLVIIDPL 585

Query: 507  PTMAGVMHQR------------KDGVYLLPAATQFETYGSVSATNRSIQWRSKVIEPLFE 554
             T      Q             +  V+ LP++   E  GS+  + R +QW  +  EP  E
Sbjct: 586  ATETSNFWQNHGELNDVDPGKIQTEVFRLPSSCFAEENGSIVNSGRWLQWHYQGAEPPGE 645

Query: 555  SLPDHVIMCKL--------AKKVGIDKELFKHIK---VNGEEPLIEDIVREYNRGMWTIG 603
            +  D VI+  L        AK+ G + E   ++    +  E+P  E+I +E N       
Sbjct: 646  ARHDGVILAGLFLRLRELYAKEGGANPEPVLNMSWDYLEPEDPSAEEITKEANGRALADL 705

Query: 604  YTGQSPERLKMHQ--ENWGTFNVDSLEAPGGPAKGETYGLPWPCWGTPEMKHPGSHILYN 661
            Y  +    LK  Q   ++     D          G T    W   G+             
Sbjct: 706  YDDKGNLLLKKGQLLPDFSLLRDD----------GSTASFCWIYAGS------------- 742

Query: 662  ETKHVKDGGGSFRARFGVERNGVNLLSEEAYSAGSEIQDGYPEFTADMLKQLGWWDDLTE 721
                  + G     R   + +G+      A+      +  Y   +AD  +Q   WD   +
Sbjct: 743  ----WTEAGNQMARRDNADPSGLGCTPGWAWCWPQNRRILYNRASAD--EQGRPWD--PK 794

Query: 722  DEKKYAEGKNWK-TDISGGIQRVVIKHGCIPY-----GNGKARAVVWNFPDDIPLHREPL 775
             E  +  G+ W   D+      V       P+     G G+  A+        P H EPL
Sbjct: 795  RELIHWNGQKWTGIDVPDFAATVPPGSAAGPFIMNAEGLGRLFAIDKMAEGPFPAHYEPL 854

Query: 776  YTPRRDLVAKYPTYEDRMVARLPTLYKSIQDKDF---AKDFPLALTSGRLVE-YEGGGEE 831
             +P    +   P Y    V     +  +  D+ +    ++FP   T+  + E +    + 
Sbjct: 855  ESP----LKTNPVYSKVQVNPAARILPA--DRPYMGTVEEFPFVATTYSITELFRHWTKH 908

Query: 832  TRSNPWLAELQQEMFIEISPADAADRGIRDGDNVFVHSPEGAKITVKAMVTPRV------ 885
             R N   A +Q E F+EI    A  +GI+ GD V V S  G  I  KA+VT R+      
Sbjct: 909  ARLN---AIVQPEQFVEIGEGLAKLKGIQGGDVVKVSSKRG-YIKAKAVVTKRIRTLTIQ 964

Query: 886  -VPGECF-MPYHFAGVFEGESLAKNYPEGTVPYVIGESANTILTYGYDVVTQMQETKSSL 943
              P E   +P H+   FEG +              G  AN +  +  D  +Q  E K+ L
Sbjct: 965  GKPVETIGVPCHWG--FEGTTQK------------GFMANILTPHVGDANSQTPEYKAFL 1010

Query: 944  CQISKA 949
              + KA
Sbjct: 1011 VNVEKA 1016