Pairwise Alignments

Query, 401 a.a., ISSod5, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 400 a.a., IS256 family transposase from Dickeya dianthicola ME23

 Score =  589 bits (1519), Expect = e-173
 Identities = 285/396 (71%), Positives = 335/396 (84%)

Query: 6   FDINAAIQALREGKDLTGKDGILTPLIKQLTEAALAAELDGHLASTEGANRKNGKTTKTV 65
           FD + A++AL+ G+ LTGKDGILTPLIKQLTEAAL+AELD HLA    ANRKNG   KT+
Sbjct: 5   FDFDKALKALQSGQALTGKDGILTPLIKQLTEAALSAELDSHLAQDVEANRKNGSGKKTI 64

Query: 66  KSPLGNFELNTPRDRAGTFEPQLVKKHQTQLTDEMERKIIGLFSLGSSYQDIRAHIEDMY 125
           K+P GNFEL TPRDR GTFEPQLVKKHQT L+DE+E KII LF+LG SYQDI   IED+Y
Sbjct: 65  KAPTGNFELATPRDRNGTFEPQLVKKHQTTLSDEIEHKIIRLFALGMSYQDISREIEDLY 124

Query: 126 GMSVSNGTVNAITDKLLPELQAWRERELEPLYPVIWLDAIHYKIKENGRFISKAVYTILA 185
             SVS  T++A+TDK++PEL+ W++R LE +YP +WLDAIHYKI+E+GR+ SKAVYT+LA
Sbjct: 125 AFSVSTATISAVTDKVIPELKQWQQRPLEQVYPFVWLDAIHYKIREDGRYQSKAVYTVLA 184

Query: 186 LNVEGKKELLGLYLSDNEGAHHWLSVLTDLYNRGVKDILIACVDGLKGFPEAIETIYPQT 245
           LN+EGKKE+LGLYLS++EGA+ WLSVL+DL NRGVKDILIACVDGL GFPEAI +IYPQT
Sbjct: 185 LNLEGKKEVLGLYLSESEGANFWLSVLSDLQNRGVKDILIACVDGLTGFPEAINSIYPQT 244

Query: 246 EVQLCVIHQIRNSMKYVASKHQKAFMADLKCVYKAATLNAAEMALDELETKWGDKYPVVI 305
           EVQLCVIHQIRNS+KYVASKH KAFM DLK VY+A +  AAEMALDELE KWG +YPVV+
Sbjct: 245 EVQLCVIHQIRNSIKYVASKHHKAFMTDLKPVYRAVSKEAAEMALDELEAKWGQQYPVVL 304

Query: 306 KSWRNKWALLSVYFKYPDYVRTAIYTTNAVEAVHRQFRKLTKTKGGFANENSLLKLLYAG 365
           +SWR KW  LS YF+YP  +R  IYTTNA+E+VHRQFRKLTKTKG F NENSLLKLLY G
Sbjct: 305 QSWRRKWDNLSAYFRYPANIRKVIYTTNAIESVHRQFRKLTKTKGAFPNENSLLKLLYLG 364

Query: 366 ILKASERWTHPIQNWNLTLSQLSIHFEGRLENHIDL 401
           ++ A  +WT PIQ+WNLTLSQL+I+FEGRL N + L
Sbjct: 365 LMNAQGKWTMPIQSWNLTLSQLAIYFEGRLNNVMTL 400