Pairwise Alignments

Query, 228 a.a., transcriptional regulatory protein CpxR (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 240 a.a., Two-component transcriptional response regulator Dtpsy_0213, OmpR family from Variovorax sp. SCN45

 Score =  176 bits (445), Expect = 5e-49
 Identities = 93/228 (40%), Positives = 139/228 (60%), Gaps = 4/228 (1%)

Query: 3   RILLIDDDLGLSELLGQLLELEGFKLTLAYDGKQGLELALATDYDLILLDVMLPKLNGFE 62
           ++L+I+DD  L+ ++G+ L   GF  + A DG  GLE       DL++LD+MLP  +G E
Sbjct: 8   QLLMIEDDTRLAHMVGEYLTQSGFGFSHAGDGTAGLEQLQQHAPDLVILDLMLPDTDGLE 67

Query: 63  VLRALRQH----KQTPVLMLTARGDEIDRVVGLEIGADDYLPKPFNDRELIARIRAIIRR 118
           V R +R       +  VLMLTA+GD +DR++GLEIGADDYLPKPF  REL+ARIRA++RR
Sbjct: 68  VCRRIRALPGPISKVSVLMLTAKGDPMDRIIGLEIGADDYLPKPFEPRELLARIRAVLRR 127

Query: 119 SHLTAQEIHATPAQEFGDLRLDPSRQEAYCNEQLIILTGTEFTLLHTLALHAGELMNKEE 178
               A E   +    FG L +D + +       L  LT  +F LL  +A  AG ++ +++
Sbjct: 128 RSENATEAEVSTVMRFGTLEIDRNARTVSVAGALADLTSYQFDLLVAMAERAGRVLTRDQ 187

Query: 179 LNEIVLGKKLMPFDRSLDMHLSNLRKKLPERSDGRPRVKTIRGKGYIW 226
           + E V G++L  FDRS+D+H+  +R  +   +    R+ T+RG GY++
Sbjct: 188 IMEAVRGRELEAFDRSIDVHMGRIRAAIEVDAKNPKRILTVRGVGYVF 235