Pairwise Alignments

Query, 279 a.a., carbohydrate kinase, PfkB family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 309 a.a., ribokinase from Escherichia coli ECOR27

 Score = 56.2 bits (134), Expect = 9e-13
 Identities = 68/302 (22%), Positives = 115/302 (38%), Gaps = 29/302 (9%)

Query: 3   NILLVANLNCDRVLLLDK---PLKTGGRFHYQDGGQRLGGGGANTGLGLVWAGHRVALVS 59
           +++++ ++N D +L L     P +T    HYQ      GG GAN  +    +G  +A ++
Sbjct: 6   SLVVLGSINADHILNLQSFPTPGETVTGNHYQVA---FGGKGANQAVAAGRSGANIAFIA 62

Query: 60  QVGRDEMGDWAIAEASTQGLDCRLVQRRAGNTCEMLLVMTPDGERTIIRPQRPVFELSVP 119
             G D +G+    + +T  +D   V    G +  + L+        +I           P
Sbjct: 63  CTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSP 122

Query: 120 PKWQHWDALYFNTSA---------EGTVSWAKTALDHCLVIAQLAKDDRPRPCHVLLASV 170
              +       N SA         E  ++ AK A  +  ++A      R  P   LLA V
Sbjct: 123 ALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELPDE-LLALV 181

Query: 171 SDMQGRCDLASWDYGVSIGGES-------------LRYFVVTDGVRGAKVYTQDDVQHVP 217
             +      A    G+ +  +              +R  ++T G RG       + Q VP
Sbjct: 182 DIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVP 241

Query: 218 AVPAEVVDTTGAGDAYAAGLIHALCAGKSITQAMAEGAVWAAFAVATDSSIPGEALKQYL 277
               + VDT  AGD +   LI AL   K + +A+      AA AV    + P    ++ +
Sbjct: 242 GFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEI 301

Query: 278 EA 279
           +A
Sbjct: 302 DA 303