Pairwise Alignments

Query, 603 a.a., virulence regulator BipA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 607 a.a., translational GTPase TypA from Rhizobium sp. OAE497

 Score =  642 bits (1655), Expect = 0.0
 Identities = 332/599 (55%), Positives = 434/599 (72%), Gaps = 6/599 (1%)

Query: 5   LRNIAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIK 64
           LRNIAIIAHVDHGKTTLVD+LL QSG+        ERVMDSNDLEKERGITILAK T+++
Sbjct: 3   LRNIAIIAHVDHGKTTLVDELLKQSGSFRENQRVAERVMDSNDLEKERGITILAKATSVE 62

Query: 65  WNDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPI 124
           W   RINIVDTPGHADFGGEVER+LSMVD  ++LVDA +GPMPQT+FV  KA   GL+PI
Sbjct: 63  WKGVRINIVDTPGHADFGGEVERILSMVDGAIVLVDASEGPMPQTKFVVGKALKVGLRPI 122

Query: 125 VVINKIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPD-VVSEDM 183
           V INKIDRP  R + VI++VFDLF NL ATDEQLDFPI+Y S  +G+  ++P+    + +
Sbjct: 123 VAINKIDRPDGRHEEVINEVFDLFANLDATDEQLDFPILYGSGRDGWMNVNPEGPKDQGL 182

Query: 184 TPLFQTIVEKVSSPDADADGPFQMQISQLDYNSYVGVIGVGRINRGSIKTNQQVSVIGAD 243
            PL   ++E V  P    +GPF M  + L+ N ++G I  GR+N GSIK NQ V V+ AD
Sbjct: 183 APLLDLVLEHVPEPTVH-EGPFTMIGTILEANPFLGRIITGRVNSGSIKPNQAVKVLHAD 241

Query: 244 GK-VRNGKMGQVLGYMGLERTEVDVANAGDIVAITGLGELKISDTVCAAGNVEAMPPLSV 302
           GK +  G++ ++L + G+ER  ++ A+AGDIVAI GL +  ++DT C     + +    +
Sbjct: 242 GKTIETGRISKILAFRGIERQPIEEAHAGDIVAIAGLSKGTVADTFCDPSVSQPLQAQPI 301

Query: 303 DEPTLTMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDRFAVSGRG 362
           D PT+TM+F VN SP+AG EG  VTSR I +RL +E   NVAL++EE+   D F VSGRG
Sbjct: 302 DPPTVTMSFIVNDSPYAGTEGDKVTSRVIRDRLFKEAEGNVALKIEESSEKDSFFVSGRG 361

Query: 363 ELHLSILIENMRREGYELAVSRPEVILKTID--GELCEPFETLTVDVEEEHQGTVIEKLG 420
           EL L++LIE MRREG+ELAVSRP V++   +  G++ EP E + +DV+EEH G V++K+ 
Sbjct: 362 ELQLAVLIETMRREGFELAVSRPRVVMHKDEATGQMLEPIEEVVIDVDEEHSGVVVQKMS 421

Query: 421 IRKAEMKDMQLDGKGRVRVDFVIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGGDI 480
            RKAEM +++  G  R+R+ F+ P+RGLIG+Q+E LT T GT ++   F  Y P+K G+I
Sbjct: 422 ERKAEMTELRPSGGNRIRLKFLAPTRGLIGYQSELLTDTRGTAVMNRLFHDYQPYK-GEI 480

Query: 481 GQRANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKG 540
           G R NGVL++N  G+A+ +ALF L+DRG + I    +VY G ++GIH+R NDL VN LKG
Sbjct: 481 GGRVNGVLLANEAGEAVAYALFNLEDRGPMIIDAGEKVYMGMIIGIHSRDNDLEVNVLKG 540

Query: 541 KQLTNMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSIRVRKKHLTENDRKR 599
           K+LTN+RA+G DEA  LT PI +TL++AL +I DDELVEVTPKSIR+RK +L  NDRKR
Sbjct: 541 KKLTNIRAAGKDEAVKLTPPIRMTLDRALSWIQDDELVEVTPKSIRLRKMYLDANDRKR 599