Pairwise Alignments

Query, 603 a.a., virulence regulator BipA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 607 a.a., ribosome-dependent GTPase TypA from Escherichia coli ECOR38

 Score =  941 bits (2431), Expect = 0.0
 Identities = 463/602 (76%), Positives = 530/602 (88%)

Query: 1   MLENLRNIAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKN 60
           ++E LRNIAIIAHVDHGKTTLVDKLL QSGT  +R E  ERVMDSNDLEKERGITILAKN
Sbjct: 1   VIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKN 60

Query: 61  TAIKWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQG 120
           TAIKWNDYRINIVDTPGHADFGGEVERV+SMVDSVLL+VDA DGPMPQTRFVTKKAFA G
Sbjct: 61  TAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYG 120

Query: 121 LKPIVVINKIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDVVS 180
           LKPIVVINK+DRPGARPDWV+DQVFDLF NL ATDEQLDFPIVYASALNG A LD + ++
Sbjct: 121 LKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMA 180

Query: 181 EDMTPLFQTIVEKVSSPDADADGPFQMQISQLDYNSYVGVIGVGRINRGSIKTNQQVSVI 240
           EDMTPL+Q IV+ V +PD D DGPFQMQISQLDYNSYVGVIG+GRI RG +K NQQV++I
Sbjct: 181 EDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTII 240

Query: 241 GADGKVRNGKMGQVLGYMGLERTEVDVANAGDIVAITGLGELKISDTVCAAGNVEAMPPL 300
            ++GK RN K+G+VLG++GLER E D+A AGDIVAITGLGEL ISDTVC   NVEA+P L
Sbjct: 241 DSEGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPAL 300

Query: 301 SVDEPTLTMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDRFAVSG 360
           SVDEPT++M F VNTSPF GKEGK+VTSR IL+RL +ELVHNVALRVEET+  D F VSG
Sbjct: 301 SVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSG 360

Query: 361 RGELHLSILIENMRREGYELAVSRPEVILKTIDGELCEPFETLTVDVEEEHQGTVIEKLG 420
           RGELHLS+LIENMRREG+ELAVSRP+VI + IDG   EP+E +T+DVEE+HQG+V++ LG
Sbjct: 361 RGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALG 420

Query: 421 IRKAEMKDMQLDGKGRVRVDFVIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGGDI 480
            RK ++K+M  DGKGRVR+D+VIPSRGLIGF++EF+T TSGTGL+Y +F HY   + G++
Sbjct: 421 ERKGDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDVRPGEV 480

Query: 481 GQRANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKG 540
           GQR NGVLISN  GKA+ FALFGLQDRG+LF+GH AEVYEGQ++GIH+RSNDLTVNCL G
Sbjct: 481 GQRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTG 540

Query: 541 KQLTNMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSIRVRKKHLTENDRKRA 600
           K+LTNMRASGTDEA VL  PI +TLEQALEFIDDDELVEVTP SIR+RK+HLTENDR+RA
Sbjct: 541 KKLTNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRRA 600

Query: 601 SR 602
           +R
Sbjct: 601 NR 602