Pairwise Alignments

Query, 603 a.a., virulence regulator BipA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 607 a.a., translational GTPase TypA from Bosea sp. OAE506

 Score =  618 bits (1594), Expect = 0.0
 Identities = 329/602 (54%), Positives = 426/602 (70%), Gaps = 5/602 (0%)

Query: 4   NLRNIAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAI 63
           ++RNIAIIAHVDHGKTTLVDKLL QSGT        ERVMDSN+LEKERGITILAK T++
Sbjct: 2   SMRNIAIIAHVDHGKTTLVDKLLQQSGTYRDNQRVIERVMDSNELEKERGITILAKATSV 61

Query: 64  KWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKP 123
            W D RINIVDTPGHADFGGEVER+L+MVDS ++LVDA +GPMPQT+FV  KA   GL+P
Sbjct: 62  VWKDTRINIVDTPGHADFGGEVERILNMVDSAIVLVDAAEGPMPQTKFVVSKALKLGLRP 121

Query: 124 IVVINKIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDP-DVVSED 182
           IV INK+D+P AR   VI++VFDLF  L ATDEQLDFPI+Y S   G+   DP     + 
Sbjct: 122 IVAINKVDKPDARVTEVINEVFDLFAALDATDEQLDFPILYGSGKQGWMAHDPAGPQDQG 181

Query: 183 MTPLFQTIVEKVSSPDADADGPFQMQISQLDYNSYVGVIGVGRINRGSIKTNQQVSVIGA 242
           + P++  I+  V  P  + +GPF+M  + L+ N Y+G I  GR+  G+ K NQQ+ V+  
Sbjct: 182 LAPMYDLILSHVPEPRIE-EGPFRMLGTLLEANPYLGRIITGRVVSGTAKPNQQIKVLSG 240

Query: 243 DGK-VRNGKMGQVLGYMGLERTEVDVANAGDIVAITGLGELKISDTVCAAGNVEAMPPLS 301
           DG  V +G++ ++L + GLERT ++ A  GDIV+I GL +  ++DT C      A+    
Sbjct: 241 DGSLVESGRITKILAFRGLERTPIEEAIPGDIVSIAGLVKGSVADTFCDPSVEIAIKAQP 300

Query: 302 VDEPTLTMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDRFAVSGR 361
           +D PT++MTF VN SP AG EG  VT+R I +RL +E   NVAL++EE    D + VSGR
Sbjct: 301 IDPPTVSMTFMVNDSPLAGTEGDKVTTRVIRDRLFKEAEGNVALKIEEAKDKDSYIVSGR 360

Query: 362 GELHLSILIENMRREGYELAVSRPEVILKTID-GELCEPFETLTVDVEEEHQGTVIEKLG 420
           GEL L+ILIE MRREG+EL VSRP V+LK  + G+L EP E + +DV+EEH G V++K+ 
Sbjct: 361 GELQLAILIEQMRREGFELGVSRPRVVLKRDENGQLLEPIEEVIIDVDEEHSGVVVQKMS 420

Query: 421 IRKAEMKDMQLDGKGRVRVDFVIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGGDI 480
            RKA+M +M+  G  R+R+ F  P+RGLIG+Q E LT T GT +I   F  Y P+K G+I
Sbjct: 421 ERKADMLEMRPSGGNRLRLMFHAPTRGLIGYQGELLTDTRGTAIINRLFHAYMPYK-GEI 479

Query: 481 GQRANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKG 540
           G R NGVLI+  TG+A+ +AL+ L+DRG + I    +VY+G +VG H R NDL VN LKG
Sbjct: 480 GGRRNGVLIAMETGEAVAYALWNLEDRGPMMIEPGWKVYQGMIVGEHTRENDLEVNVLKG 539

Query: 541 KQLTNMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSIRVRKKHLTENDRKRA 600
           K+LTN+R +  DEA  LT PI +TLE++L +IDDDELVEVTPKSIR+RK  L  N+RKR+
Sbjct: 540 KKLTNIRTTSKDEAVRLTPPIRMTLERSLAWIDDDELVEVTPKSIRLRKGILDPNERKRS 599

Query: 601 SR 602
            +
Sbjct: 600 QK 601