Pairwise Alignments

Query, 603 a.a., virulence regulator BipA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 608 a.a., GTP-binding protein TypA/BipA from Azospirillum sp. SherDot2

 Score =  649 bits (1675), Expect = 0.0
 Identities = 339/603 (56%), Positives = 430/603 (71%), Gaps = 5/603 (0%)

Query: 4   NLRNIAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAI 63
           NLRN+AIIAHVDHGKTTLVD+LL Q+G+     +  ER MDSNDLE+ERGITILAK T++
Sbjct: 2   NLRNVAIIAHVDHGKTTLVDQLLKQAGSFRENQQVAERAMDSNDLERERGITILAKCTSV 61

Query: 64  KWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKP 123
            WND RINIVDTPGHADFGGEVER+LSMVD V+LL DA +GP+PQT+FV  KA   GL+P
Sbjct: 62  LWNDLRINIVDTPGHADFGGEVERILSMVDGVVLLCDAAEGPLPQTKFVLGKALKLGLRP 121

Query: 124 IVVINKIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLD-PDVVSED 182
           IVVINK+DRP  RP  V D+VFDLF +L A++EQLDFP ++AS  NG+AT D  +   E 
Sbjct: 122 IVVINKVDRPDGRPHEVHDEVFDLFASLDASNEQLDFPTLFASGRNGWATTDLENGARET 181

Query: 183 MTPLFQTIVEKVSSPDADADGPFQMQISQLDYNSYVGVIGVGRINRGSIKTNQQVSVIGA 242
           +TPLF+ I + V +P  + D PF M  + L+ N Y+G I  GRI  GS+K N  V  +  
Sbjct: 182 LTPLFELIRDHVPAPKVEEDLPFSMLATTLEANPYLGRILTGRILTGSVKVNMAVKSMSR 241

Query: 243 DGK-VRNGKMGQVLGYMGLERTEVDVANAGDIVAITGLGELKISDTVCAAGNVEAMPPLS 301
           DGK + N ++ +VL + GLER  VD A+AGDI+A+ GL    ++DT+CA    EA+    
Sbjct: 242 DGKLIENARISKVLAFRGLERVPVDEAHAGDIIALAGLTNTTVADTICAPEVAEAIHAQP 301

Query: 302 VDEPTLTMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDRFAVSGR 361
           +D PTL MTF VN SP AG+EG  VTSR I +RL +E   NVALR+ +T+  D F V+GR
Sbjct: 302 IDPPTLAMTFSVNDSPLAGREGDKVTSRMIRDRLFREAEGNVALRISDTEGGDAFEVAGR 361

Query: 362 GELHLSILIENMRREGYELAVSRPEVILKT--IDGELCEPFETLTVDVEEEHQGTVIEKL 419
           GEL L ILIE MRREGYELA+SRP V+ KT  ++G+  EP E + VDV+EE  GTV++K+
Sbjct: 362 GELQLGILIETMRREGYELAISRPRVLFKTDPLNGQRLEPIEEVVVDVDEEFSGTVVQKM 421

Query: 420 GIRKAEMKDMQLDGKGRVRVDFVIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGGD 479
             RKA++ +M+  G  + R+ F  PSRGLIG+Q EFLT T GTG++   F  Y P KG  
Sbjct: 422 SERKADLIEMRPSGGNKTRIVFHAPSRGLIGYQGEFLTDTRGTGIMNRLFHGYAPFKGA- 480

Query: 480 IGQRANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLK 539
           I  R  GVLISN+ G A+ +AL+ L+DRG + I     VY+G ++G H R NDL VN +K
Sbjct: 481 IAARRTGVLISNSDGTAVAYALWNLEDRGPMLIDPGVLVYQGMIIGEHTRGNDLEVNVIK 540

Query: 540 GKQLTNMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSIRVRKKHLTENDRKR 599
           GKQLTN+R +  DEA  LT PI +TLE+AL +I DDELVEVTPKSIR+RK++L  N+RKR
Sbjct: 541 GKQLTNIRTTSKDEAVRLTPPIQMTLEKALSYISDDELVEVTPKSIRLRKRYLDPNERKR 600

Query: 600 ASR 602
            SR
Sbjct: 601 HSR 603