Pairwise Alignments

Query, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 314 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  153 bits (387), Expect = 5e-42
 Identities = 85/205 (41%), Positives = 120/205 (58%), Gaps = 13/205 (6%)

Query: 132 IAKKGEIYP----MTSLEERNRELESIIQARTYELAEANNRLEKLSNTDGLTNIGNRRLF 187
           + K GE+      M  + ER +  E +++ +         +LE+ S  DGLT IGNRR+F
Sbjct: 108 VRKDGEVEALIGFMFDISERKKTEEHLLRLQ--------KQLEEYSYQDGLTGIGNRRMF 159

Query: 188 DQMLQKEWSRGQRNNTPLSLIMLDIDHFKLFNDHYGHLAGDDCLKMLANGLSQSGRRAGE 247
           D +L++EW+  QR+  PLSLI+LDID FK +NDHYGH+ GD+CL+ +A+ LSQ+  R  +
Sbjct: 160 DTVLEREWTSAQRSQLPLSLIILDIDFFKQYNDHYGHIKGDECLRQVAHTLSQAANRPRD 219

Query: 248 LVARYGGEEFVILLPNTDLQTALDTAKHVHQLIQSLAIPH-IKTNLGIVTVSVGVACLLP 306
            +AR GGEEFV LLP TD Q+A   A+    LI+   I H       ++T+S+GV   + 
Sbjct: 220 FIARIGGEEFVWLLPETDAQSARQVAQRCLHLIRQQQIEHGFSAVSNLLTLSLGVGTCIV 279

Query: 307 SDKHNALELVHQADTALYLAKSAGR 331
                 L  V + D  LY AK  GR
Sbjct: 280 KPDSPMLGFVEEVDKLLYQAKRNGR 304