Pairwise Alignments

Query, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 598 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  160 bits (406), Expect = 6e-44
 Identities = 85/178 (47%), Positives = 113/178 (63%), Gaps = 9/178 (5%)

Query: 164 EANNRLEKLSNTDGLTNIGNRRLFDQMLQKEWSRGQRNNTPLSLIMLDIDHFKLFNDHYG 223
           EA  RL  L+  DGLT I NRR FD+ L +EW R  R  TPLSL+M+D+DHFK +NDHYG
Sbjct: 413 EAELRLRHLAMNDGLTGIANRRAFDETLGQEWRRASRAGTPLSLLMIDVDHFKAYNDHYG 472

Query: 224 HLAGDDCLKMLANGLSQSGRRAGELVARYGGEEFVILLPNTDLQTALDTAKHVHQLIQSL 283
           H AGD+CLK +A  L+ + +R  +LVARYGGEEF ++LP++ L  A   A+ +   I  L
Sbjct: 473 HQAGDECLKAVAATLAATAKRPADLVARYGGEEFGVILPSSTLADAQALAEKMRLAIARL 532

Query: 284 AIPHIKTNL-GIVTVSVGVACL--------LPSDKHNALELVHQADTALYLAKSAGRN 332
            +PH  +     VT+S+GV+CL        LP +  +   L+  AD ALY AK+ GRN
Sbjct: 533 ELPHEASQTEKTVTISIGVSCLNLAESPGALPRNGLDTQILIAHADNALYRAKTTGRN 590