Pairwise Alignments

Query, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 232 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  149 bits (376), Expect = 7e-41
 Identities = 78/172 (45%), Positives = 106/172 (61%), Gaps = 1/172 (0%)

Query: 162 LAEANNRLEKLSNTDGLTNIGNRRLFDQMLQKEWSRGQRNNTPLSLIMLDIDHFKLFNDH 221
           LAEA+  +  LS TDGLT I NRR FD+ L  E++R  R+ TP+ L++LDID FKLFND+
Sbjct: 54  LAEAHAAVLALSRTDGLTGIANRRWFDESLAHEFARALRSKTPIGLLLLDIDCFKLFNDN 113

Query: 222 YGHLAGDDCLKMLANGLSQSGRRAGELVARYGGEEFVILLPNTDLQTALDTAKHVHQLIQ 281
           YGH AGDDCL+ +A  +    +R  ++ ARYGGEE V LLP+T L         V   ++
Sbjct: 114 YGHAAGDDCLRKVAQAVRSVVKRPPDMTARYGGEEIVCLLPDTGLDGVFRVGNAVLDAVR 173

Query: 282 SLAIPH-IKTNLGIVTVSVGVACLLPSDKHNALELVHQADTALYLAKSAGRN 332
           +L IPH       IVTVS+G   ++P+       ++  AD+ LY +K  GRN
Sbjct: 174 ALDIPHRFSKATDIVTVSIGGVSIIPAQDMTPTNIIEAADSHLYQSKEHGRN 225