Pairwise Alignments

Query, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 239 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  152 bits (385), Expect = 6e-42
 Identities = 84/195 (43%), Positives = 117/195 (60%), Gaps = 3/195 (1%)

Query: 150 ELESIIQARTYELAEANNRLEKLSNTDGLTNIGNRRLFDQMLQKEWSRGQRNNTPLSLIM 209
           EL     A    LAEA+  +  +S TD LT I NRR FD+ L +E +R  R+ T L L++
Sbjct: 45  ELVEQFVASERRLAEAHATVLAMSRTDALTGIANRRWFDESLAQELARANRSKTSLGLLL 104

Query: 210 LDIDHFKLFNDHYGHLAGDDCLKMLANGLSQSGRRAGELVARYGGEEFVILLPNTDLQTA 269
           +DID FKLFND+YGH AGDDCL+ +A  +    RR  +L ARYGGEE V +LP+TD +  
Sbjct: 105 MDIDCFKLFNDNYGHSAGDDCLQAVAQAVQSIVRRPPDLAARYGGEELVCILPDTDAKGV 164

Query: 270 LDTAKHVHQLIQSLAIPH-IKTNLGIVTVSVGVACLLPSDKHNALELVHQADTALYLAKS 328
                 V + ++ LAIPH     + IVTVS+G   L+P++     +++  AD+ LY +K 
Sbjct: 165 EAVGNAVLEAVRGLAIPHAFSKAVDIVTVSIGGVSLIPTEATTPKQIIEAADSVLYASKE 224

Query: 329 AGRNCIR--SAPPNG 341
            GRN +    AP +G
Sbjct: 225 GGRNRLTMVDAPMDG 239