Pairwise Alignments

Query, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 625 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  148 bits (374), Expect = 3e-40
 Identities = 83/205 (40%), Positives = 120/205 (58%), Gaps = 8/205 (3%)

Query: 146 ERNRELESIIQARTYELA-------EANNRLEKLSNTDGLTNIGNRRLFDQMLQKEWSRG 198
           E N  LE  +Q RT EL        E N +L + S  D LT + NR  FD+ L  E    
Sbjct: 420 ETNERLEQKVQERTLELEITLRELHEVNQKLTEQSTIDSLTGVKNRSAFDKRLLAESRIS 479

Query: 199 QRNNTPLSLIMLDIDHFKLFNDHYGHLAGDDCLKMLANGLSQSGRRAGELVARYGGEEFV 258
           +R  TP++L+MLDID FK  ND +GHLAGD  LK++A  L Q  +R  +LV+R+GGEEF 
Sbjct: 480 RRQETPIALLMLDIDRFKSINDQFGHLAGDQALKLIAQTLQQHLKRPTDLVSRFGGEEFA 539

Query: 259 ILLPNTDLQTALDTAKHVHQLIQSLAIPHIKTNLGIVTVSVGVACLLPSDKHNALELVHQ 318
           I+LPNT    AL  A+ +   +  + +      + + TVS+GV+  +  ++ ++ EL+ Q
Sbjct: 540 IILPNTTADGALQVAESIRDTVSCIGLTWEGKPIPL-TVSIGVSADVIMNEQHSTELLEQ 598

Query: 319 ADTALYLAKSAGRNCIRSAPPNGTQ 343
           AD ALY AK++GRN ++   P  T+
Sbjct: 599 ADKALYQAKNSGRNQVKLYAPAQTE 623