Pairwise Alignments

Query, 500 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1446 a.a., ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein from Bacteroides ovatus ATCC 8483

 Score =  108 bits (270), Expect = 1e-27
 Identities = 78/260 (30%), Positives = 135/260 (51%), Gaps = 12/260 (4%)

Query: 247  LYYLGTILIVTIILAVGFMAFMLYREFNRATRLASQQVSFVGQVSHELKTPLTNITLYAE 306
            LY++  IL    I+ V F  + L    +   +LA+ ++ F   +SHEL+TPLT I+    
Sbjct: 883  LYFILFILFTASIVYVLFYIYRLRHRVDMEQQLANIKLRFFTDISHELRTPLTLISSPVT 942

Query: 307  MLNEMEAEENDQRAHYLGVIISESQRLSRLIQNVLTFTKLP----QICIRQVDINQLMNQ 362
             + E E      R H L ++   ++R+ RL+  +L F K+     ++ I + D+  L+ +
Sbjct: 943  EVLENEPLSPSAREH-LTLVHQNTERMLRLMNQILDFRKIQNQKMKLLIEETDLIPLLQK 1001

Query: 363  IYTAFKPVFEAKEIHLNLNINGQ-LSTKTDVDLVTQIISNLLSNAEKYAATGKQVDLNVE 421
            + ++FK + E K I+  L    Q + +  D D   +I  NLLSNA KY    K + +N+ 
Sbjct: 1002 VMSSFKLIAEEKNINYQLTSTIQSVYSWVDRDKFEKIFFNLLSNAFKYTPADKSITVNIT 1061

Query: 422  QDNDNIFIHIRDYGNGITAKELKQIFQPFYR-VRSSITEGVSGTGIGLTIARQLAETLSG 480
                 + I + D G GI  ++   +FQ F   V+ +I +    +GIGL++ +++ E   G
Sbjct: 1062 TKEKTVEIEVADEGIGIAVEKQHSLFQRFESLVKQNILQ--PSSGIGLSLVKEMVEMHHG 1119

Query: 481  EINAINNEPGM--TFTLRLP 498
             I  +N++PG+   FT+ LP
Sbjct: 1120 TI-TVNSQPGVGSRFTVSLP 1138