Pairwise Alignments

Query, 500 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 777 a.a., ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein from Bacteroides ovatus ATCC 8483

 Score =  105 bits (263), Expect = 4e-27
 Identities = 79/278 (28%), Positives = 149/278 (53%), Gaps = 27/278 (9%)

Query: 242 VKGQSLYYLGTILIVTIILAVGFMAFMLYREFNRATRLASQ--------------QVSFV 287
           V+ +S   +G I +  ++L+  F+  ++ R+ +R+ R   Q              +   +
Sbjct: 219 VRMRSARIIGGIAVGAVLLSAFFL-ILIMRDISRSNRYRQQLEVANKRAEDLLIAREKLM 277

Query: 288 GQVSHELKTPLTNITLYAEMLNEMEAEENDQRAHYLGVIISESQRLSRLIQNVLTFTKLP 347
             ++H+ K PL +I  Y E+L+ +   E++++  YL  + S S+ L +L+ ++L F +L 
Sbjct: 278 LAITHDFKAPLGSIMGYTELLSRLT--EDERQRFYLDNMKSSSEHLLKLVSDLLDFHRLD 335

Query: 348 --QICIRQVDIN--QLMNQIYTAFKPVFEAKEIHLNLNINGQLSTK--TDVDLVTQIISN 401
             +  + +V  N  QL ++IY +F+P+  AK + L  ++  +L+ +  +D   + QI++N
Sbjct: 336 LNKAEVNRVTFNPSQLFDEIYVSFEPLTAAKGLALQCHVVPELNGRYISDPLRLRQIVNN 395

Query: 402 LLSNAEKYAATGKQVDLNVEQDNDNIFIHIRDYGNGITAKELKQIFQPFYRVRSSITEGV 461
           LLSNA K+   G ++ L    D+  + I I D G G+  ++ ++IFQ F R+  S  +G 
Sbjct: 396 LLSNAVKFTQKG-EISLTAGYDSSKLTIAIADTGKGMALEDRERIFQEFTRL--SGAQGE 452

Query: 462 SGTGIGLTIARQLAETLSGEINAINN-EPGMTFTLRLP 498
            G G+GL+I ++L   L G I+  +    G  FT+ LP
Sbjct: 453 EGFGLGLSIVKKLVTLLEGTIDVQSTLGKGSCFTVTLP 490