Pairwise Alignments

Query, 500 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 518 a.a., ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein from Bacteroides ovatus ATCC 8483

 Score =  105 bits (263), Expect = 3e-27
 Identities = 78/262 (29%), Positives = 133/262 (50%), Gaps = 11/262 (4%)

Query: 246 SLYYLGTILIVTIILAVGFMAFMLYREFNRATRLASQQVSFVGQVSHELKTPLTNITLYA 305
           S+ ++   LI T++L V F+ F +Y  F R  +L   +  F+  ++HE KTP++ I+L A
Sbjct: 254 SISFMIPSLIFTLVLLVTFI-FTIYIVF-RQKKLTEMKNDFINNMTHEFKTPISTISLAA 311

Query: 306 EMLNEMEAEENDQR-AHYLGVIISESQRLSRLIQNVLTFTKLPQ----ICIRQVDINQLM 360
           +ML +    ++ Q   H  GVI  E++RL   ++ VL  +   +    + ++++D N+L+
Sbjct: 312 QMLKDPAVGKSPQMFQHISGVINDETKRLRFQVEKVLQMSMFERQKATLKMKEIDANELI 371

Query: 361 NQIYTAFKPVFEAKEIHLNLNINGQLSTK-TDVDLVTQIISNLLSNAEKYAATGKQVDLN 419
             +   F    E     +  N+         D   +T +I NL+ NA KY    + ++L 
Sbjct: 372 AGVVNTFALKVERYNGKITSNLEATDPVIFADEMHITNVIFNLMDNAVKYKKPEEDLELK 431

Query: 420 VEQDNDN--IFIHIRDYGNGITAKELKQIFQPFYRVRSSITEGVSGTGIGLTIARQLAET 477
           V   N++  + I I+D G GI  + LK+IF+ FYRV +     V G G+GL   R++   
Sbjct: 432 VRTWNESGKLMISIQDNGIGIKKENLKKIFEKFYRVHTGNLHDVKGFGLGLAYVRKIILD 491

Query: 478 LSGEINAINN-EPGMTFTLRLP 498
             G I A ++   G  F + LP
Sbjct: 492 HKGTIRAESDLNVGTKFIIALP 513