Pairwise Alignments

Query, 405 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase II, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 389 a.a., beta-ketoacyl-[acyl-carrier-protein] synthase II from Escherichia coli ECRC99

 Score =  306 bits (785), Expect = 5e-88
 Identities = 179/399 (44%), Positives = 235/399 (58%), Gaps = 14/399 (3%)

Query: 5   VAITQIGLCTPLGQTPEQVLARLIAGDTSAMQTSDSLLFGQ-STLVAPVTESLPTIPAAL 63
           + I+ +G+   LG   +++   L  G    M+     L G    ++A V   LP IP   
Sbjct: 2   IYISAVGMINALGNNLDEIATNLTRGVAPGMRPRAGWLQGHPQAVLAGVDGELPLIPEKF 61

Query: 64  TQFDCRNNQLLLAAALQITDTVELAKQTYGADRIGVVLGTSTSGIAKGELALAYRNQHGH 123
                RNNQ+LLAA  QI   V+ A   YG +RI +VLGTSTSG+ +G+  +  R  HG 
Sbjct: 62  AAHRSRNNQILLAALAQIQPQVDDAIAKYGRERIAIVLGTSTSGLHEGDTHVNLRT-HGQ 120

Query: 124 FPADYHYFQQELGSTSDFLRQLFELQGPSYTISTACSSSAKVFASAKRLLEAKLCDMVIV 183
               +HY QQELG  S FL     L GP+YT+STACSSSA+   S +RL+EA L D  IV
Sbjct: 121 PSTTWHYAQQELGDPSRFLSHWLALDGPAYTLSTACSSSARAIISGRRLIEAGLVDAAIV 180

Query: 184 GGIDSLCQLTVNGFHALESVSKGHCNPFSANRDGINIGEGAALFTLTLATDNTANEACVL 243
           GG D+L ++ +NGFH+LES+S   C PF  +R GI IGEGA L  LT      A      
Sbjct: 181 GGADTLSRMPINGFHSLESLSPTLCQPFGRDRAGITIGEGAGLMLLTREPQPIA------ 234

Query: 244 LAGIGESSDAHHMSAPHPEGAGAIAAMKAALRDAQISAQDIDYINLHGTATPKNDAMESR 303
           L G+GESSDA+H+SAPHP+G GAI A+  AL DAQ++  D+ YINLHGTAT  ND +ES 
Sbjct: 235 LLGVGESSDAYHISAPHPQGEGAIRAINQALTDAQLTPDDVGYINLHGTATQLNDQIESM 294

Query: 304 AVLSVFGDTPPPASSTKPLVGHTLGAAGAIEAAFCYLLLSQHNHSFALPPHRFDGQQDPQ 363
            V ++FG+   P SSTK L GHTLG AG  EAA   L+L +      LP    D    P+
Sbjct: 295 VVNALFGER-VPCSSTKHLTGHTLGTAGITEAAISMLILQRD-----LPLPAQDFSLSPR 348

Query: 364 DPSIALVAPMQCAEHGKLNYVMSNSFAFGGSNASLIFCR 402
           DP++     ++  +      ++SNSFAFGG+NAS++  R
Sbjct: 349 DPTLPPCGIIEKPQPLARPVILSNSFAFGGNNASILLGR 387