Pairwise Alignments

Query, 182 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 188 a.a., Predicted membrane protein from Kangiella aquimarina DSM 16071

 Score =  154 bits (388), Expect = 1e-42
 Identities = 81/183 (44%), Positives = 118/183 (64%), Gaps = 5/183 (2%)

Query: 4   LLQVLTALALIAYPVAVYLGLNYLPAGTIALVLCLLLIVRLMLQKQR-VKTLA----LPL 58
           L + L A  ++ YP+AVY GL +L   TIA++L  L+++R  + + + ++T+     + L
Sbjct: 5   LFKFLIAFVVLLYPIAVYFGLQHLQPKTIAIILAALVLLRGFIARSKLIETMKGLWLIVL 64

Query: 59  LVGIALTAGSFVAKRSDWLLYYPVVINLTMLALFSYSLYQGPSMIERLARLKEPDLPDEA 118
           +VG+ +   SF+   +  L  YPV+I  + LA+F YSLY  P++IER ARL+  +LP EA
Sbjct: 65  VVGLLVAGLSFILNSALGLKLYPVIITGSFLAVFGYSLYAPPTIIERFARLQTSELPPEA 124

Query: 119 IGYLKKVTLLWCGLFILNGTMAAYTASFTSLATWTLYNGLIAYVLMGLLLGGEWLYRSFW 178
           I Y  KVT +WC  FI+N  ++ YT  FTS+  W LYNGLI+Y+LMGLL  GEW YR   
Sbjct: 125 IPYTTKVTKIWCLFFIINILVSLYTVFFTSVEIWALYNGLISYLLMGLLFIGEWGYRRLV 184

Query: 179 LKK 181
           LK+
Sbjct: 185 LKQ 187