Pairwise Alignments

Query, 205 a.a., anaerobic dimethyl sulfoxide reductase, B subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 184 a.a., 4Fe-4S dicluster domain-containing protein from Serratia liquefaciens MT49

 Score =  149 bits (376), Expect = 3e-41
 Identities = 77/186 (41%), Positives = 102/186 (54%), Gaps = 16/186 (8%)

Query: 6   QYGFYVDTTKCSGCKTCQVACKDRSDIEVGKQWRRTYEYCGGNWTADGQGAYHQDVFAYY 65
           QYGF VD   C GCKTC +ACK  +    G  WRR  E+   ++ A    A+        
Sbjct: 4   QYGFLVDMRGCYGCKTCSMACKSENATPAGVLWRRVREF---HFDAPNAMAF-------- 52

Query: 66  ISISCNHCSNPVCVKACPTGAMYKERSTGLVKVNQDLCIGCESCARACPYDAPQIDPQRK 125
           IS+SCNHC +P C+K CP    Y +R  G+V  + D CIGC  C  ACPY+AP  DP   
Sbjct: 53  ISMSCNHCDDPQCMKVCPADT-YSKRPDGIVVQDHDKCIGCRMCIMACPYNAPVFDPVEG 111

Query: 126 VMTKCDGCSDRVAKGLKPSCVMSCPQRALDFGLIAELKQQYGND----SDISGLPSSSIT 181
             +KC+ C++R+ +GL P CV SCP   L FG I EL+ ++  D         LP   I+
Sbjct: 112 KTSKCNLCAERLDEGLLPRCVASCPAGVLQFGDIDELRARHSADLARIETRYSLPDHRIS 171

Query: 182 HPNLVL 187
            PN+V+
Sbjct: 172 QPNIVI 177