Pairwise Alignments

Query, 205 a.a., anaerobic dimethyl sulfoxide reductase, B subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 208 a.a., Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.5.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  263 bits (671), Expect = 2e-75
 Identities = 115/204 (56%), Positives = 148/204 (72%), Gaps = 5/204 (2%)

Query: 6   QYGFYVDTTKCSGCKTCQVACKDRSDIEVGKQWRRTYEYCGGNWTADGQGAYHQDVFAYY 65
           QYGFYVD+++CSGCKTCQV+CKD  D++VG + RR YEY GG+W  +G+ ++H D F YY
Sbjct: 3   QYGFYVDSSRCSGCKTCQVSCKDNKDLDVGPKLRRVYEYGGGSWVKEGE-SWHHDTFTYY 61

Query: 66  ISISCNHCSNPVCVKACPTGAMYKERSTGLVKVNQDLCIGCESCARACPYDAPQIDPQRK 125
           +SI+CNHC  PVCV  CPTGAM+K +  GLV V+  +C+GC  C   CPY APQ D Q  
Sbjct: 62  LSIACNHCDEPVCVSGCPTGAMHKRKEDGLVVVDDSVCVGCRYCEMRCPYGAPQFDTQAN 121

Query: 126 VMTKCDGCSDRVAKGLKPSCVMSCPQRALDFGLIAELKQQYGNDSDISGLPSSSITHPNL 185
           VM KCDGC DR+   L+P CV SCPQRALDFG + EL+ +YG ++ I+ LPS+S THPNL
Sbjct: 122 VMRKCDGCLDRLENNLRPICVDSCPQRALDFGPVDELRAKYGTENQIAPLPSASFTHPNL 181

Query: 186 VLKVHAKSGQRGE----IINITEV 205
           ++K H K+   G+    I+NI EV
Sbjct: 182 IIKPHPKARPTGDTEGAIMNIREV 205