Pairwise Alignments

Query, 205 a.a., anaerobic dimethyl sulfoxide reductase, B subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 223 a.a., NrfC protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  115 bits (288), Expect = 6e-31
 Identities = 63/178 (35%), Positives = 90/178 (50%), Gaps = 15/178 (8%)

Query: 6   QYGFYVDTTKCSGCKTCQVACKDRSDIEVGKQWRRTYEYCGGNWTADGQGAYHQDVFAYY 65
           +YG   D + C GC  C  AC++ + +  G               ++ QG +  DV   +
Sbjct: 36  RYGMVHDESLCIGCTACMDACREVNTVPEGVSRLTIIR-------SEPQGTF-PDVKYRF 87

Query: 66  ISISCNHCSNPVCVKACPTGAMYKERSTGLVKVNQDLCIGCESCARACPYDAPQIDPQRK 125
              SC HC +  CV  CPTGA +++ ++G+V VN DLC+GC+ C  ACPY    I P  K
Sbjct: 88  FRHSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVSK 147

Query: 126 VMTKCDGC-SDRVAKGLKPSCVMSCPQRALDFGLIAELKQQYGNDSDISGLPSSSITH 182
              KCD C    +  G +P+CV SCP +AL FG + +       +SDIS L     T+
Sbjct: 148 TADKCDFCRKTNLKAGKQPACVESCPTKALTFGNLDD------PNSDISRLLRQKTTY 199