Pairwise Alignments

Query, 205 a.a., anaerobic dimethyl sulfoxide reductase, B subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 300 a.a., formate dehydrogenase-O, Fe-S subunit from Escherichia coli BL21

 Score =  112 bits (280), Expect = 7e-30
 Identities = 58/160 (36%), Positives = 82/160 (51%), Gaps = 7/160 (4%)

Query: 11  VDTTKCSGCKTCQVACKDRSDIE--VGKQ---WRRTYEYCGGNWTADGQGAYHQ-DVFAY 64
           +D T C GCK CQVAC + +DI   VG     +    +    +WT        Q D   +
Sbjct: 34  IDVTTCIGCKACQVACSEWNDIRDTVGNNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEW 93

Query: 65  YI-SISCNHCSNPVCVKACPTGAMYKERSTGLVKVNQDLCIGCESCARACPYDAPQIDPQ 123
            I    C HCS+P C+KACP      + + G+V    + CIGC  C   CP+D P+++P+
Sbjct: 94  LIRKDGCMHCSDPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPE 153

Query: 124 RKVMTKCDGCSDRVAKGLKPSCVMSCPQRALDFGLIAELK 163
              + KC  C DRV  G +P+CV +CP  A+ FG    +K
Sbjct: 154 DNRVYKCTLCVDRVVVGQEPACVKTCPTGAIHFGTKESMK 193