Pairwise Alignments

Query, 205 a.a., anaerobic dimethyl sulfoxide reductase, B subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 205 a.a., dimethyl sulfoxide reductase, anaerobic, subunit B from Escherichia coli BL21

 Score =  238 bits (606), Expect = 7e-68
 Identities = 106/194 (54%), Positives = 142/194 (73%), Gaps = 2/194 (1%)

Query: 5   TQYGFYVDTTKCSGCKTCQVACKDRSDIEVGKQWRRTYEYCGGNWTADGQGAYHQDVFAY 64
           TQYGF++D+++C+GCKTC++ACKD  D+     +RR YEY GG+W  D  G +HQ+VFAY
Sbjct: 3   TQYGFFIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAGGDWQEDN-GVWHQNVFAY 61

Query: 65  YISISCNHCSNPVCVKACPTGAMYKERSTGLVKVNQDLCIGCESCARACPYDAPQIDPQR 124
           Y+SISCNHC +P C K CP+GAM+K R  G V V++D+CIGC  C  ACPY APQ +  +
Sbjct: 62  YLSISCNHCEDPACTKVCPSGAMHK-REDGFVVVDEDVCIGCRYCHMACPYGAPQYNETK 120

Query: 125 KVMTKCDGCSDRVAKGLKPSCVMSCPQRALDFGLIAELKQQYGNDSDISGLPSSSITHPN 184
             MTKCDGC DRVA+G KP CV SCP RALDFG I EL++++G+ + ++ LP +  T PN
Sbjct: 121 GHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRKKHGDLAAVAPLPRAHFTKPN 180

Query: 185 LVLKVHAKSGQRGE 198
           +V+K +A S   G+
Sbjct: 181 IVIKPNANSRPTGD 194