Pairwise Alignments

Query, 290 a.a., transcriptional regulator ilvY (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 4/249 (1%)

Query: 1   MDIRSLKLYLHLCDSLHFAKTAEQMHVSPSTLSRALQRLEEEVNAKLFERDNRSVTLTHA 60
           MD+ +L  ++ + ++  F+   E++H++   +S+ +  LE+++  +LF+R  R V LT A
Sbjct: 1   MDLANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLKVRLFDRLGREVGLTEA 60

Query: 61  GREFKLFAEQTLHHWRNLRHSIDLKQDVLRGTLNLYCSVTAAYSHLPQLLERFRQEHPFV 120
           GR     A Q L+   + R ++      + G L L  S       LP +L  F +E+P V
Sbjct: 61  GRALLPRAYQILNVLDDTRRALTNLTGEVSGRLTLATSHHIGLHRLPPVLRTFTREYPNV 120

Query: 121 EIALTTGDAANALAEIQQNRADIAIAAL-PDPFPATLHFAKIDDVPLSLIAPTMRCAVQQ 179
            + +   D+  A  EI   RA++A+  L PDP          DD    ++AP        
Sbjct: 121 ALDIQFLDSEVAYEEILHGRAEVAVITLAPDPHNLVRATPVWDDPLDFVVAPEHSLISNG 180

Query: 180 QISQTQIDWARVPFIIPDHGPGRRR-ADNWFKQMGISPNIYAQVSGQEAIASMVALGCGV 238
            +S   I  A  P + P             F+  G++PNI    +  E I  MV++G   
Sbjct: 181 SVSLADI--AGHPAVFPGGNTFTHHIVSRLFEAQGLTPNIAMSTNYLETIKMMVSIGLAW 238

Query: 239 SISPEVVIN 247
           S+ P  +++
Sbjct: 239 SVLPRTMLD 247