Pairwise Alignments

Query, 290 a.a., transcriptional regulator ilvY (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 296 a.a., Transcriptional regulators, LysR family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 76/298 (25%), Positives = 139/298 (46%), Gaps = 18/298 (6%)

Query: 1   MDIRSLKLYLHLCDSLHFAKTAEQMHVSPSTLSRALQRLEEEVNAKLFERDNRSVTLTHA 60
           M+ R L+ +L L + LHF + A+++ ++   LS  +Q+LE  V A+LF R++R V LT A
Sbjct: 1   MEFRHLRYFLVLAEELHFGRAAQRLAITQPPLSLNIQQLEASVGAQLFTRNSRGVQLTAA 60

Query: 61  GREFKLFAEQTLHH-WRNLRHSIDLKQDVLRGTLNLYCSVTAAYSHLPQLLERFRQEHPF 119
           G+ F   A   L    +  R + ++ Q ++ G+L +  + T  Y  LPQ+L+ F   HP 
Sbjct: 61  GQAFVPAARALLDQAGQAAREAREVAQGLV-GSLQIGFAGTVLYRGLPQILQGFAARHPR 119

Query: 120 VEIALTTGDAANALAEIQQNRADIAIAALPDPFPATLHFAKIDDVPLSLIAPTMRC-AVQ 178
           + + L    +++ L ++   R D+         PA+     +   P     P     A +
Sbjct: 120 LRLVLREMSSSDQLIDLMHERLDLGFVH-TTRVPASFSQILVSSQPFVACLPVGHALARR 178

Query: 179 QQISQTQIDWARVPFII------PDHGPGRRRADNWFKQMGISPNIYAQVSGQEAIASMV 232
           +++S  ++     PF +      PD+     R        G SP I  ++    ++ S+V
Sbjct: 179 RRVSLVKLQGE--PFAVVSRAVSPDY---HERILGLCADAGFSPEIRYELRHWLSVVSLV 233

Query: 233 ALGCGVSISPEVVINNSPVRDRIQLLPSPVSIAPFELGCCCKVKRLGDPIVNAFLEAI 290
           + G GV++ P   +  + +   +  +P  V   P++  C  K  R     + AFL+A+
Sbjct: 234 SQGLGVALVP-AALQQAGLPGAV-FVPLDVETPPYDTHCLWKTDR-DQAALAAFLDAV 288