Pairwise Alignments

Query, 290 a.a., transcriptional regulator ilvY (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 297 a.a., Transcriptional regulator, LysR family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 14/269 (5%)

Query: 1   MDIRSLKLYLHLCDSLHFAKTAEQMHVSPSTLSRALQRLEEEVNAKLFERDNRSVTLTHA 60
           M++R L+ ++ L D LHF + A+++H+S   LS  +++LE  +  +L ERD+RSV LT A
Sbjct: 1   MELRHLRYFVVLADELHFGRAAKRLHISQPPLSFNIKQLETNLGVQLLERDSRSVKLTPA 60

Query: 61  GREFKLFAEQTLHHWRNLRHSIDLKQDVLRGT---LNLYCSVTAAYSHLPQLLERFRQEH 117
           G  F+  A+  L        +    +DV  G    + +    +  +  LP+ L+RF+  H
Sbjct: 61  GVSFRQSAQLVL---AEADQAARKARDVAAGVTTRVRIGFVGSMLFRGLPESLDRFQASH 117

Query: 118 PFVEIALTTGDAANALAEIQQNRADIAIAALPDPFPATLHFAKIDDVPLSLIAPTMRCAV 177
           P V   L   ++A  +  + + + D+     P+  P+ L  A     P  L  P    A 
Sbjct: 118 PQVRAELVELNSAEQIDALGRGQIDLGFVHTPN-VPSNLSTALYMSEPFVLCTPHRAGAR 176

Query: 178 QQQISQTQIDWARVPFIIPDHGPG---RRRADNWFKQMGISPNIYAQVSGQEAIASMVAL 234
           ++  +  Q+  A  P ++   G       R      Q+G+ P +  +V    ++ ++V+ 
Sbjct: 177 RRPRTVAQV--AGEPLVLFSRGASPDYYERVLTLCAQLGLDPAVRHEVRHWLSVVALVSK 234

Query: 235 GCGVSISPEVVINNSPVRDRIQLLPSPVS 263
           G G ++ P+ +++       +Q  P P S
Sbjct: 235 GTGYALVPQAMMHGGV--SAVQFTPLPES 261