Pairwise Alignments

Query, 290 a.a., transcriptional regulator ilvY (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 298 a.a., LysR family transcriptional regulator from Pectobacterium carotovorum WPP14

 Score = 89.7 bits (221), Expect = 7e-23
 Identities = 73/253 (28%), Positives = 120/253 (47%), Gaps = 17/253 (6%)

Query: 1   MDIRSLKLYLHLCDSLHFAKTAEQMHVSPSTLSRALQRLEEEVNAKLFERDNRSVTLTHA 60
           +++R L+ ++ + + LHF + AE++ +S   LS+ +Q LEE+V AKL  R+NR+V LT A
Sbjct: 3   IELRHLRYFIAVAEELHFGRAAERLRISQPPLSQQIQILEEQVGAKLLARNNRNVQLTPA 62

Query: 61  GREFKLFAEQTLHHWRNLRHSIDLKQDVLRGTL-NLYCSVTAAYSHLPQL---LERFRQE 116
           G   ++F ++       +  + +    + RG +  L    T++   + ++   L RFRQ 
Sbjct: 63  G---EMFLKEAWSIISQVDQAAERASRIQRGEIGELTIGFTSSAPFIKKISSSLLRFRQT 119

Query: 117 HPFVEIALTTGDAANALAEIQQNRADIAIAALPDPFPATLHFAKIDDVPLSLIAPTMRCA 176
           +P V I +   +    +  +   + DI I    +P P  L    +   PL  +       
Sbjct: 120 YPEVHIQMMELNTKQQIEPLLNGKLDIGIMR-NNPLPDALDHQLLLSEPLIAVVQESHPL 178

Query: 177 VQQQ----ISQTQIDWARVPFIIPDHGPGRRRADN---WFKQMGISPNIYAQVSGQEAIA 229
            QQ     IS TQ+  A  PF+      G    D+     K+ GISP I  +V     I 
Sbjct: 179 AQQDAGRAISITQL--ANEPFVFFSRAVGTALYDDTLTLLKRYGISPYITQEVGEAMTIV 236

Query: 230 SMVALGCGVSISP 242
            +V+ G GVSI P
Sbjct: 237 GLVSAGLGVSILP 249