Pairwise Alignments

Query, 290 a.a., transcriptional regulator ilvY (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 296 a.a., HTH-type transcriptional activator IlvY from Pectobacterium carotovorum WPP14

 Score =  317 bits (811), Expect = 3e-91
 Identities = 156/293 (53%), Positives = 211/293 (72%), Gaps = 4/293 (1%)

Query: 1   MDIRSLKLYLHLCDSLHFAKTAEQMHVSPSTLSRALQRLEEEVNAKLFERDNRSVTLTHA 60
           MD+R LKL+LHL +S HF +TA+ MH+SPSTLSR +QRLEE++   LF RDNR+V LT A
Sbjct: 1   MDLRDLKLFLHLAESRHFGRTAKAMHISPSTLSRQIQRLEEDLGQTLFLRDNRTVQLTDA 60

Query: 61  GREFKLFAEQTLHHWRNLRHSIDLKQDVLRGTLNLYCSVTAAYSHLPQLLERFRQEHPFV 120
           G   KLFA+QTL  ++ LRH+ID     L G L ++CSVTAAYSHLP +L+RFR  HP V
Sbjct: 61  GEHLKLFAQQTLLQYQQLRHTIDQHGPSLSGELRIFCSVTAAYSHLPPILDRFRALHPLV 120

Query: 121 EIALTTGDAANALAEIQQNRADIAIAALPDPFPATLHFAKIDDVPLSLIAPTMRCAVQQQ 180
           EI LTTGDAA+A+ +IQ N  D+ IA  P+  PA++ F  +D +PL+LI P + C VQ  
Sbjct: 121 EIKLTTGDAADAVEKIQSNDGDLGIAGRPEALPASVDFMPLDKLPLALIIPALPCPVQSL 180

Query: 181 ISQTQIDWARVPFIIPDHGPGRRRADNWFKQMGI-SPNIYAQVSGQEAIASMVALGCGVS 239
           + QT  DW+++PFI+P+HGP R+R D WF++  I +P IYA +SG EA+ SMVALGCG++
Sbjct: 181 VRQTDPDWSQIPFILPEHGPVRKRIDLWFRRNHITNPQIYATISGHEAMVSMVALGCGIA 240

Query: 240 ISPEVVINNS--PVRDRIQLLPSPVSIAPFELGCCCKVKRLGDPIVNAFLEAI 290
           + P VV+ NS  PVR+R+ +L   V + P ELG C + KRL +P++ AF + +
Sbjct: 241 LIPNVVLENSPEPVRNRVSVLVEQV-MEPLELGVCVQKKRLSEPLIAAFWDIL 292