Pairwise Alignments

Query, 290 a.a., transcriptional regulator ilvY (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 295 a.a., HTH-type transcriptional activator IlvY from Dickeya dianthicola 67-19

 Score =  309 bits (792), Expect = 4e-89
 Identities = 155/293 (52%), Positives = 208/293 (70%), Gaps = 4/293 (1%)

Query: 1   MDIRSLKLYLHLCDSLHFAKTAEQMHVSPSTLSRALQRLEEEVNAKLFERDNRSVTLTHA 60
           MD+R LKL+LHL +S HF +TA+ MH+SPSTLSR +QRLEE++   LF RDNR+V LT A
Sbjct: 1   MDLRDLKLFLHLVESRHFGRTAKAMHISPSTLSRQIQRLEEDIGQALFLRDNRTVRLTDA 60

Query: 61  GREFKLFAEQTLHHWRNLRHSIDLKQDVLRGTLNLYCSVTAAYSHLPQLLERFRQEHPFV 120
           G   K FA+QTL  ++ LR  +  +   L G L L+CSVTAAYSHLP +L+RFR  +P V
Sbjct: 61  GEHLKTFAQQTLLQYQQLRLILQQRGQSLGGELRLFCSVTAAYSHLPPILDRFRARYPLV 120

Query: 121 EIALTTGDAANALAEIQQNRADIAIAALPDPFPATLHFAKIDDVPLSLIAPTMRCAVQQQ 180
           EI LTTGDAA+AL ++Q N AD+ IA  P+  P ++ F  I  VPL LI P + C VQ +
Sbjct: 121 EIKLTTGDAADALDKVQSNEADLGIAGHPETLPGSVDFMPIGKVPLVLIMPALPCPVQTR 180

Query: 181 ISQTQIDWARVPFIIPDHGPGRRRADNWFKQMGI-SPNIYAQVSGQEAIASMVALGCGVS 239
             Q   DW+++PFI+P+HGP R+R D WF++  I +P IYA VSG EA+ SMVALGCG++
Sbjct: 181 ALQPHPDWSQIPFILPEHGPVRKRIDVWFRRQHITNPPIYATVSGHEAMVSMVALGCGIA 240

Query: 240 ISPEVVINNS--PVRDRIQLLPSPVSIAPFELGCCCKVKRLGDPIVNAFLEAI 290
           + P+VV+ NS  PVR+R+ +L +  ++ PFELG C + KRL DP++ AF E +
Sbjct: 241 LIPDVVLENSPEPVRNRVSILEAQ-AMEPFELGVCVQKKRLNDPLIAAFWETL 292