Pairwise Alignments

Query, 290 a.a., transcriptional regulator ilvY (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 304 a.a., LysR family transcriptional regulator from Dickeya dadantii 3937

 Score = 87.0 bits (214), Expect = 5e-22
 Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 22/255 (8%)

Query: 1   MDIRSLKLYLHLCDSLHFAKTAEQMHVSPSTLSRALQRLEEEVNAKLFERDNRSVTLTHA 60
           +++R L+ ++ + + LHF + AE++H+S   LS+ +Q LEE++ A+L ER+NR+V LT A
Sbjct: 3   IELRHLRYFVAVAEELHFGRAAEKLHISQPPLSQQIQALEEQIGAQLLERNNRNVRLTQA 62

Query: 61  GREFKLFAEQTLHHWRNLRHSIDLKQDVLRGTLNLYCSVTAAY-SHLPQLLERFRQEHPF 119
           G  F   A   ++            Q    G LN+  + +A +   + + L +FRQ +P 
Sbjct: 63  GELFLKEAWAIINQVNQAAERAARIQRGEIGELNIGFTSSAPFVKQVSRSLLQFRQSYPE 122

Query: 120 VEIALTTGDAANALAEIQQNRADIAIAALPDPFPATLHFAKIDDVPLSLI---------A 170
           V I +   +    +  +   + D+ +    +P P TL    +   P+  +         A
Sbjct: 123 VHIQMLEINTKQQIEPLLDGKLDLGVMR-NNPLPETLRHQLLLHEPMVAVVHEEHPLAAA 181

Query: 171 PTMRCAVQQQISQTQIDWARVPFIIPDHGPGRRRAD---NWFKQMGISPNIYAQVSGQEA 227
           P    ++QQ  S+        PF+      G    D      K+ GI+P I  +V     
Sbjct: 182 PGGHISIQQLASE--------PFVFFAREVGTALYDEVLTLLKKYGITPYITQEVGEAMT 233

Query: 228 IASMVALGCGVSISP 242
           I  +V+ G GVS+ P
Sbjct: 234 IIGLVSSGLGVSLLP 248