Pairwise Alignments

Query, 290 a.a., transcriptional regulator ilvY (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 299 a.a., LysR family transcriptional regulator from Dickeya dadantii 3937

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 3/246 (1%)

Query: 2   DIRSLKLYLHLCDSLHFAKTAEQMHVSPSTLSRALQRLEEEVNAKLFERDNRSVTLTHAG 61
           D++SL+L+L +       KTAE  H++ S LS+ +  LE  V+  LF R  R + LT AG
Sbjct: 8   DLQSLRLFLQVARIGSLTKTAETFHMTLSALSKRMAELERTVDCTLFIRMPRGLALTAAG 67

Query: 62  REFKLFAEQTLHHWRNLRHSIDLKQDVLRGTLNLYCSVTAAYSHLPQLLERFRQEHPFVE 121
           +E    A Q +     +   +      +RG ++++ + +A    LPQ L  F Q HP V 
Sbjct: 68  KELVQLARQVVGSVERMAGEMQDYAAGVRGHVHIWANTSAIIEFLPQDLAHFLQRHPLVR 127

Query: 122 IALTTGDAANALAEIQQNRADIAIAALPDPFPATLHFAKIDDVPLSLIAPTMRCAVQQQI 181
           I L    +   +  +   +AD+ I A   P P        +D  + L++P    A  ++I
Sbjct: 128 INLEEKLSETVVTALLTGQADLGIFADNVPSPGVEKIPYREDQLVVLVSPRHPLAEHREI 187

Query: 182 SQTQIDWARVPFIIPDHGPG-RRRADNWFKQMGISPNIYAQVSGQEAIASMVALGCGVSI 240
             T  D     F+  ++G    +   +  ++ G    +  QVS  + +  M+  G G+SI
Sbjct: 188 --TFADALPYDFVGLNNGSSLLKLLQDTAEEHGKMLRLRIQVSSFDGVCRMIEAGLGISI 245

Query: 241 SPEVVI 246
            PE  I
Sbjct: 246 LPEGAI 251